Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)
  Primates
(199)
  Rodents
(12,016)
  Mammals
(754)
  Vertebrates
(1,115)
  Invertebrates
(3,796)
  Plants
(6,479)
  Bacteria
(2,920)
  Viruses
(51)
  Phages
(4)
  Unclassified
(249)
  All
(45,516)
 
  SAGE NlaIII
(76)
  SAGE RsaI
(1)
  SAGE Sau3A
(10)
  MPSS
(5)
  GeneChip
(6,053)
  Tiling Array
(284)
  cDNA Array
(717)
  Oligo Array
(2,718)
  Bead Array
(888)
  Protein Array
(0)
  Antibody
(3)
  RT-PCR
(82)
  HT-Seq
(1,149)
  Other
(30)
  All
(12,016)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
41 Astrocyte proximity modulates the myelination gene fabric of oligodendrocytes (GSE18726) [Oligo Array] Duke Mouse 30k Oligonucleotide Array Operon V3.0.1 (GPL8938) Albert Einstein College of Medicine 2009-10-25 Mus musculus
Mus musculus
269,568
(33,696 x 8)
4 4 by_platform
by_series
42 Transcriptomic alterations in Trypanosoma cruzi-infected cardiac myocytes (GSE17330) [Oligo Array] AECOM 32K MOUSE OLIGONUCLEOTIDE ARRAY, MO2 printing series (GPL5371) Albert Einstein College of Medicine 2009-07-26 Mus musculus
Mus musculus
268,800
(33,600 x 8)
8 by_platform
by_series
43 Cardiac gene expression and systemic cytokine profile are complementary in a murine model of post ischemic heart failure (GSE18703) [Oligo Array] AECOM 32K MOUSE OLIGONUCLEOTIDE ARRAY, MO2 printing series (GPL5371) Albert Einstein College of Medicine 2009-10-22 Mus musculus
Mus musculus
268,800
(33,600 x 8)
8 by_platform
by_series
44 Alterations in the Brain Transcriptome in Plasmodium Berghei ANKA Infected Mice (GSE24086) [Oligo Array] AECOM 32K MOUSE OLIGONUCLEOTIDE ARRAY, MO2 printing series (GPL5371) Albert Einstein College of Medicine 2010-09-12 Mus musculus
Mus musculus
201,600
(33,600 x 6)
6 by_platform
by_series
45 Astrocyte proximity modulates the myelination gene fabric of oligodendrocytes (GSE18726) [Oligo Array] Duke Mouse 36K oligonucleotide array Operon V4.0 (GPL8928) Albert Einstein College of Medicine 2009-10-25 Mus musculus
Mus musculus
150,528
(37,632 x 4)
4 by_platform
by_series
46 Sleep Deprivation and Recovery Sleep for 7 Regions of Mouse Brain. (GSE23628) [Oligo Array] GE Healthcare/Amersham Biosciences CodeLinkâ„¢ Mouse Whole Genome Bioarray (GPL2897) Allen Institute for Brain Science 2010-08-13 Mus musculus
Mus musculus
6,428,800
(45,920 x 140)
140 by_platform
by_series
47 Changes in gene expression in the retina of diabetic Long Evans rats after one, four, and twelve weeks of diabetes (GSE28831) [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Probe Name version) (GPL7294) Allergan, Inc. 2011-04-25 Rattus norvegicus
Rattus norvegicus
863,520
(41,120 x 21)
21 by_platform
by_series
48 The transcriptomic signature of hungry murine liver (GSE10653) [Oligo Array] Agilent-011472 Mouse Development Oligo Microarray G4120A (Feature Number version) (GPL922) AMC 2008-02-27 Mus musculus
Mus musculus
270,900
(22,575 x 12)
12 by_platform
by_series
49 Fasting induces a biphasic adaptive metabolic response in murine small intestine (GSE8019) [Oligo Array] Agilent-011472 Mouse Development Oligo Microarray G4120A (Feature Number version) (GPL922) AMC 2007-06-05 Mus musculus
Mus musculus
270,900
(22,575 x 12)
12 by_platform
by_series
50 CGH analysis of inbred mouses strains (GSE9186) [Oligo Array] Agilent-014695 Mouse Genome CGH Microarray 244A (G4415A) (Feature Number version) (GPL4092) Amgen Inc 2007-09-27 Mus musculus
Mus musculus
20,454,336
(243,504 x 84)
84 by_platform
by_series
51 Pancreatic islet expression profiling in diabetes prone C57BLKS/J mice vs C57BL6/J mice. (GSE11257) [Oligo Array] Agilent-012694 Whole Mouse Genome G4122A (Feature Number version) (GPL2872) Amgen Inc. 2008-04-24 Mus musculus
Mus musculus
841,510
(44,290 x 19)
19 by_platform
by_series
52 Gene expression signature of DMBA induced hamster buccal pouch carcinomas: Modulation by chlorophyllin, and ellagic acid (GSE29679) [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Feature Number version) (GPL4135) Annamalai Universuty 2011-06-01 Mesocricetus auratus
Mesocricetus auratus
271,320
(45,220 x 6)
6 by_platform
by_series
53 Dosage dependent tumor suppression by histone deacetylase 1 and 2 by regulation of Myc collaborating genes and p53 function (GSE43407) [Oligo Array] Nimblegen 12-plex 135K full genome mouse custom NKI array [091016_MM9_RK_CGH_HX12] (GPL13924) Antoni van Leeuwenhoek hospital 2013-01-10 Mus musculus
Mus musculus
823,326
(137,221 x 6)
6 by_platform
by_series
54 Whole genome survey of the obesity model lean congenic mice B6.C-D7Mit353 (GSE7431) [Oligo Array] ABI Mouse Genome Survey Microarray (GPL2995) Applied Biosystems 2007-04-02 Mus musculus
Mus musculus
825,300
(33,012 x 25)
7 6 6 6 by_platform
by_series
55 microRNA-146b improves intestinal injury in mouse colitis by activating NF-kB and improving epithelial barrier function (GSE40708) [Oligo Array] mirVANA miRNA Bioarray V2 (GPL5106) Asahikawa Medical University 2012-09-07 Mus musculus
Mus musculus
1,324
(662 x 2)
2 by_platform
by_series
56 Murine lung tumors- HER2(V659E) and KRAS(G12V) vs normal lung (GSE18784) [Oligo Array] Agilent-012694 Whole Mouse Genome G4122A (Feature Number version) (GPL2872) AVEO Pharmaceuticals 2009-10-28 Mus musculus
Mus musculus
4,340,420
(44,290 x 98)
26 72 by_platform
by_series
57 HSF1 regulates transcription of sex-chromosomal multicopy genes during post-meiotic repression (GSE22492) [Oligo Array] 1.5 kb mouse promoter ChIP-chip (MM5, NimbleGen Systems Inc.) (GPL6344) Ã…bo Akademi University 2010-06-22 Mus musculus
Mus musculus
78,387
(26,129 x 3)
3 by_platform
by_series
58 Analysis of HSF2 target genes using a global promoter ChIP-chip strategy on mouse wild-type testis (GSE9289) [Oligo Array] 1.5 kb mouse promoter ChIP-chip (MM5, NimbleGen Systems Inc.) (GPL6344) Ã…bo Akademi University 2007-10-10 Mus musculus
Mus musculus
78,387
(26,129 x 3)
3 by_platform
by_series
59 Effect of Malat1 ASO on Neuro2 neuroblastoma cells transcriptome (GSE19928) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version) (GPL4134) École Normale Supérieure 2010-01-18 Mus musculus
Mus musculus
271,320
(45,220 x 6)
6 by_platform
by_series
60 Characterization of boundary cap cells using novel markers obtained by RNA profiling (GSE11979) [Oligo Array] ENS SGDB Mus musculus 22k Compugen (GPL7017) École Normale Supérieure 2008-07-03 Mus musculus
Mus musculus
178,176
(22,272 x 8)
8 by_platform
by_series
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