Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(76)
  SAGE RsaI
(1)
  SAGE Sau3A
(10)
  MPSS
(5)
  GeneChip
(7,316)
  Tiling Array
(312)
  cDNA Array
(732)
  Oligo Array
(3,361)
  Bead Array
(1,268)
  Protein Array
(0)
  Antibody
(5)
  RT-PCR
(117)
  HT-Seq
(2,116)
  Other
(45)
  All
(15,364)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
1 ICAT quantitative proteomic analysis of Myc-induced apoptosis (GSE3159) [Other] Proteins in mitochondrial, chromatin, and soluble fractions of Myc-induced apoptosis in Rat1 fibroblasts (GPL2771) UTHSCSA 2005-08-17 Rattus norvegicus
Rattus norvegicus
3,159
(1,053 x 3)
3 by_platform
by_series
2 Metabolic programs orchestrated by the activated Ha-ras and ÃŽroteins in mouse liver tumors [protein] (GSE51357) [Other] ZeptoMARK assay platform (GPL17787) University of Tuebingen 2013-10-17 Mus musculus
Mus musculus
2,528
(158 x 16)
16 by_platform
by_series
3 Metabolic programs orchestrated by the activated Ha-ras and β-catenin oncoproteins in mouse liver tumors (GSE51358) [Other] ZeptoMARK assay platform (GPL17787) University of Tuebingen 2013-10-17 Mus musculus
Mus musculus
2,528
(158 x 16)
16 by_platform
by_series
4 proteomic survey of lung development and nmyc function in the lung (GSE6108) [Other] lung_development_Nmyc_mouse (GPL4477) University of Toronto 2006-10-23 Mus musculus
Mus musculus
187,013
(3,979 x 47)
47 by_platform
by_series
5 Regulation of dendritic cells and macrophages by an anti-apoptotic cell natural Ab that inhibits inflammatory arthritis (GSE14969) [Other] Mouse Human T15 Apoptotic Cell protein array (GPL8204) UC San Diego School of Medicine 2009-02-24 Mus musculus
Mus musculus
480
(32 x 15)
15 by_platform
by_series
6 IgM Abs to Apoptosis-associated Determinants recruit C1q and enhance dendritic cell phagocytosis of apoptotic cells (GSE14958) [Other] Mouse Human T15 Apoptotic Cell protein array (GPL8204) UC San Diego School of Medicine 2009-02-23 Mus musculus
Mus musculus
352
(32 x 11)
6 5 by_platform
by_series
7 Pathogenic Natural Antibodies Recognizing Annexin IV Are Required to Develop Intestinal Ischemia-Reperfusion Injury (GSE14862) [Other] Mus musculus spotted antigen array (GPL8165) UC San Diego School of Medicine 2009-02-17 Mus musculus
Mus musculus
276
(69 x 4)
1 3 by_platform
by_series
8 A metabolomics analysis of Salmonella infection (GSE21720) [Other] Mouse metabolomics mass spec data (GPL10454) The University of British Columbia 2010-05-06 Mus musculus
Mus musculus
14
(0 x 14)
6 8 by_platform
by_series
9 Metabolomics reveals phospholipids as important nutrient sources during Salmonella growth in bile in vitro and in vivo (GSE30404) [Other] Mouse metabolomics mass spec data (GPL10454) The University of British Columbia 2011-07-05 Mus musculus
Mus musculus
10
(0 x 10)
10 by_platform
by_series
10 A metabolomics analysis of gallbladder lipid droplet formation due to Salmonella infection (GSE27604) [Other] Mouse metabolomics mass spec data (GPL10454) The University of British Columbia 2011-03-01 Mus musculus
Mus musculus
9
(0 x 9)
9 by_platform
by_series
11 The effect of antibiotic treatment on the intestinal metabolome (GSE25687) [Other] Mouse metabolomics mass spec data (GPL10454) The University of British Columbia 2010-11-29 Mus musculus
Mus musculus
8
(0 x 8)
8 by_platform
by_series
12 MaPTOL on MmREST (GSE9268) [Other] MaPTOL for REST (GPL5955) The Scripps Research Institute 2007-10-09 Mus musculus
Mus musculus
49,833
(49,833 x 1)
1 by_platform
by_series
13 microRNA-135b promotes cancer progression acting as a downstream effector of oncogenic pathways in colon cancer (mouse) (GSE54177) [Other] NanoString nCounter Mouse miRNA expression chip (mirBase 15) (GPL17873) The Ohio State University 2014-01-16 Mus musculus
Mus musculus
14,472
(603 x 24)
24 by_platform
by_series
14 Immunosignatures can predict vaccine efficacy (GSE51623) [Other] CIM10Kv3 (GPL17830) The Biodesign Institute at Arizona State University 2013-10-23 Mus musculus
Mus musculus
1,017,500
(10,175 x 100)
100 by_platform
by_series
15 Mice with fibrinogen-induced arthritis (FIA) (GSE18073) [Other] Synovial protein array 0.5K v2.0 (GPL9165) Stanford University 2009-09-11 Mus musculus
Mus musculus
7,085
(545 x 13)
5 8 by_platform
by_series
16 Murine serum reactivity to common autoantigens in response to immunization with neutrophil extracellular traps (GSE32542) [Other] Utz Lab Whole Protein Autoantigen Array V2.0 (GPL14638) Stanford University 2011-10-01 Mus musculus
Mus musculus
5,760
(144 x 40)
40 by_platform
by_series
17 Specific post-translational histone mod. of neutrophil extracellular traps as immunogens & potential SLE Ab targets. (GSE32544) [Other] Utz Lab Whole Protein Autoantigen Array V2.0 (GPL14638) Stanford University 2011-10-01 Mus musculus
Mus musculus
5,760
(144 x 40)
40 by_platform
by_series
18 Mice with FIA develop anti-native and anti-in vitro citrullinated fibrinogen antibodies (GSE18023) [Other] Synovial protein array 0.5K v1.0 (GPL9163) Stanford University 2009-09-08 Mus musculus
Mus musculus
5,560
(556 x 10)
10 by_platform
by_series
19 Mice with fibrinogen-induced arthritis (FIA) (GSE18073) [Other] Synovial protein array 0.5K v1.0 (GPL9163) Stanford University 2009-09-11 Mus musculus
Mus musculus
5,560
(556 x 10)
10 by_platform
by_series
20 Interferon regulatory factor 5 expression levels regulate murine lupus in a type-I interferon-independent manner (GSE17926) [Other] Utz Lab Whole Protein Autoantigen Array V1.0 (GPL9059) Stanford University 2009-09-01 Mus musculus
Mus musculus
5,460
(78 x 70)
70 by_platform
by_series
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