| 1 |
GPL8 |
Cerebellargenexp |
897 |
RIKEN Brain Science Institute |
2001-04-18 |
|
Mus musculus
 |
GeneChip |
spotted DNA/cDNA, Cerebellargenexp, The Affymetrix GeneChip Mu11K was used to analyze the gene expression profile in developing mouse cerebellum (two GeneChips per E18, P7, P14, P21, and P56) to assist in the understanding of the genetic basis of cerebellar development in mice. The analysis showed 81.6% (10,321/12,654) of the genes represented on the GeneChip were expressed in the postnatal cerebellum, and among those, 8.7% (897/10,321) were differentially expressed with more than a two-fold change in their maximum and minimum expression levels during the developmental time course. All of these 897 differentially expressed genes were listed in this platform. The explanation of gene function classification is as follows: CGDD (cellular growth, differentiation, and death), CLAM (carbohydrate, lipid, and amino acid metabolism), CSC (cell structure and communication), IMTN (intra/intercellular molecular transport and neurotransmission), NNM (nucleotide and nucleic acid metabolism), ST (signal transduction), and TTPM (transcription, translation, and protein modification). Keywords = cerebellum, postnatal development, high-density oligonucleotide array |
| 2 |
GPL11 |
SAGE:10:NlaIII:Mus musculus |
789,532 |
|
2001-06-04 |
|
Mus musculus
|
SAGE NlaIII |
SAGE NlaIII, SAGE:10:NlaIII:Mus musculus, |
| 3 |
GPL23 |
SAGE:10:NlaIII:Rattus norvegicus |
190,885 |
|
2001-11-12 |
|
Rattus norvegicus
 |
SAGE NlaIII |
SAGE NlaIII, SAGE:10:NlaIII:Rattus norvegicus, |
| 4 |
GPL24 |
EOSS002A |
39,114 |
Cambridge Institute for Medical Research |
2001-11-15 |
|
Mus musculus
|
GeneChip |
in situ oligonucleotide, EOSS002A, Custom Affymetrix GeneChip designed by Eos Biotechnology Inc. to measure the expression of a large number of genes or ESTs on a single array. This is achieved by choosing those probes from within each set of 20 Affymetrix perfect match probes that show the least random fluctuation relative to the perceived specific hybridization over a wide ranging set of samples (Glynne et al. 2000). Experiments undertaken by Eos have revealed that the mismatch probes do not increase sensitivity or reproducibility (RJG and GG unpublished data). Consequently, each gene on the Eos array is represented by 6-8 perfect match probes, as opposed to 20 perfect match and 20 mismatch probes, increasing the number of genes for which expression can be assayed in parallel to >39,000. |
| 5 |
GPL34 |
[MG_U74C] Affymetrix Murine Genome U74C Array |
12,728 |
Affymetrix, Inc. |
2002-01-17 |
Affymetrix |
Mus musculus
|
GeneChip |
in situ oligonucleotide, [MG_U74C] Affymetrix Murine Genome U74C Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The MG-U74 version 1 set comprises three arrays representing over 36,000 mouse genes and ESTs. Keywords = high density oligonucleotide array |
| 6 |
GPL32 |
[MG_U74A] Affymetrix Murine Genome U74A Array |
12,654 |
Affymetrix, Inc. |
2002-01-17 |
Affymetrix |
Mus musculus
|
GeneChip |
in situ oligonucleotide, [MG_U74A] Affymetrix Murine Genome U74A Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 21, 2012: annotation table updated with netaffx build 32 |
| 7 |
GPL33 |
[MG_U74B] Affymetrix Murine Genome U74B Array |
12,636 |
Affymetrix, Inc. |
2002-01-17 |
Affymetrix |
Mus musculus
|
GeneChip |
in situ oligonucleotide, [MG_U74B] Affymetrix Murine Genome U74B Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The MG-U74 version 1 set comprises three arrays representing over 36,000 mouse genes and ESTs. Keywords = high density oligonucleotide array |
| 8 |
GPL69 |
Mouse 9K UCLA |
9,504 |
UCLA |
2002-02-13 |
|
Mus musculus
|
cDNA Array |
spotted DNA/cDNA, Mouse 9K UCLA, This is the mouse 9K platform from UCLA Microarray Core Facility. This platform fits axon output data including blank spots. |
| 9 |
GPL81 |
[MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array |
12,488 |
Affymetrix, Inc. |
2002-02-19 |
Affymetrix |
Mus musculus
|
GeneChip |
in situ oligonucleotide, [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 07, 2012: annotation table updated with netaffx build 32 |
| 10 |
GPL82 |
[MG_U74Bv2] Affymetrix Murine Genome U74B Version 2 Array |
12,477 |
Affymetrix, Inc. |
2002-02-19 |
Affymetrix |
Mus musculus
|
GeneChip |
in situ oligonucleotide, [MG_U74Bv2] Affymetrix Murine Genome U74B Version 2 Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 21, 2012: annotation table updated with netaffx build 32 |
| 11 |
GPL83 |
[MG_U74Cv2] Affymetrix Murine Genome U74 Version 2 Array |
11,934 |
Affymetrix, Inc. |
2002-02-19 |
Affymetrix |
Mus musculus
|
GeneChip |
in situ oligonucleotide, [MG_U74Cv2] Affymetrix Murine Genome U74 Version 2 Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 21, 2012: annotation table updated with netaffx build 32 |
| 12 |
GPL85 |
[RG_U34A] Affymetrix Rat Genome U34 Array |
8,799 |
Affymetrix, Inc. |
2002-02-19 |
Affymetrix |
Rattus norvegicus
|
GeneChip |
in situ oligonucleotide, [RG_U34A] Affymetrix Rat Genome U34 Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 08, 2012: annotation table updated with netaffx build 32 |
| 13 |
GPL86 |
[RG_U34B] Affymetrix Rat Genome U34 Array |
8,791 |
Affymetrix, Inc. |
2002-02-19 |
Affymetrix |
Rattus norvegicus
|
GeneChip |
in situ oligonucleotide, [RG_U34B] Affymetrix Rat Genome U34 Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 21, 2012: annotation table updated with netaffx build 32 |
| 14 |
GPL87 |
[RG_U34C] Affymetrix Rat Genome U34 Array |
8,789 |
Affymetrix, Inc. |
2002-02-19 |
Affymetrix |
Rattus norvegicus
|
GeneChip |
in situ oligonucleotide, [RG_U34C] Affymetrix Rat Genome U34 Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 21, 2012: annotation table updated with netaffx build 32 |
| 15 |
GPL78 |
[Mu19KsubB] Affymetrix Murine 19K SubB Array |
7,054 |
Affymetrix, Inc. |
2002-02-19 |
Affymetrix |
Mus musculus
|
GeneChip |
in situ oligonucleotide, [Mu19KsubB] Affymetrix Murine 19K SubB Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html Has 21146 entries and was indexed 29-Jan-2002. Keywords = high density oligonucleotide array |
| 16 |
GPL79 |
[Mu19KsubC] Affymetrix Murine 19K SubC Array |
7,047 |
Affymetrix, Inc. |
2002-02-19 |
Affymetrix |
Mus musculus
|
GeneChip |
in situ oligonucleotide, [Mu19KsubC] Affymetrix Murine 19K SubC Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html Has 21146 entries and was indexed 29-Jan-2002. Keywords = high density oligonucleotide array |
| 17 |
GPL77 |
[Mu19KsubA] Affymetrix Murine 19K SubA Array |
7,045 |
Affymetrix, Inc. |
2002-02-19 |
Affymetrix |
Mus musculus
|
GeneChip |
in situ oligonucleotide, [Mu19KsubA] Affymetrix Murine 19K SubA Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html Has 21146 entries and was indexed 29-Jan-2002. Keywords = high density oligonucleotide array |
| 18 |
GPL76 |
[Mu11KsubB] Affymetrix Murine 11K SubB Array |
6,595 |
Affymetrix, Inc. |
2002-02-19 |
Affymetrix |
Mus musculus
|
GeneChip |
in situ oligonucleotide, [Mu11KsubB] Affymetrix Murine 11K SubB Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html Has 13179 entries and was indexed 29-Jan-2002. Keywords = high density oligonucleotide array |
| 19 |
GPL75 |
[Mu11KsubA] Affymetrix Murine 11K SubA Array |
6,584 |
Affymetrix, Inc. |
2002-02-19 |
Affymetrix |
Mus musculus
|
GeneChip |
in situ oligonucleotide, [Mu11KsubA] Affymetrix Murine 11K SubA Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 21, 2012: annotation table updated with netaffx build 32 |
| 20 |
GPL88 |
[RN_U34] Affymetrix Rat Neurobiology U34 Array |
1,322 |
Affymetrix, Inc. |
2002-02-19 |
Affymetrix |
Rattus norvegicus
|
GeneChip |
in situ oligonucleotide, [RN_U34] Affymetrix Rat Neurobiology U34 Array, Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 21, 2012: annotation table updated with netaffx build 32 |
|