Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(836)
  Primates
(10)
  Rodents
(586)
  Mammals
(39)
  Vertebrates
(49)
  Invertebrates
(184)
  Plants
(231)
  Bacteria
(113)
  Viruses
(2)
  Phages
(0)
  Unclassified
(8)
  All
(2,065)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(280)
  Tiling Array
(40)
  cDNA Array
(4)
  Oligo Array
(104)
  Bead Array
(62)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(9)
  HT-Seq
(85)
  Other
(2)
  All
(586)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
21 Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk (GSE28254) [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) Radboud University, Nijmegen Center for Molecular Life Sciences 2011-03-29 Mus musculus
Mus musculus
2
(0 x 2)
2 by_platform
by_series
22 A molecular and phenotypic integrative approach to identify a no effect dose level for anti-androgen induced testicular toxicity (GSE28202) [Oligo Array] Agilent-014879 Whole Rat Genome Microarray 4x44K G4131F (Probe Name version) (GPL7294) Bayer Cropscience 2011-03-28 Rattus norvegicus
Rattus norvegicus
1,727,040
(41,120 x 42)
42 by_platform
by_series
23 Gene Expression Analysis of Transgenic Myc-Driven Liver Tumor Formation and Regression (GSE28198) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version) (GPL7202) UCSF 2011-03-28 Mus musculus
Mus musculus
619,170
(41,278 x 15)
15 by_platform
by_series
24 Mouse oral tumors induced by activation of Ras and p53 mutations (GSE28203) [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) MD Anderson Cancer Center 2011-03-28 Mus musculus
Mus musculus
405,909
(45,101 x 9)
9 by_platform
by_series
25 Altered gene expression in the mouse heart after 2-day fasting (GSE28226) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version) (GPL7202) Keio Univ School of Medicine 2011-03-28 Mus musculus
Mus musculus
330,224
(41,278 x 8)
8 by_platform
by_series
26 DNA Microarray Analysis Approach for Unraveling the Ischemic Mouse Brain Transcriptome (GSE28201) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version) (GPL4134) University of Tsukuba 2011-03-28 Mus musculus
Mus musculus
180,880
(45,220 x 4)
4 by_platform
by_series
27 Expression profiling of KSR1-/- MEFs expressing KSR1 and/or H-RasV12 (GSE28228) [GeneChip] [MG_U74Av2] Affymetrix Murine Genome U74A Version 2 Array (GPL81) Univ. of Nebraska Medical Center 2011-03-28 Mus musculus
Mus musculus
149,856
(12,488 x 12)
12 by_platform
by_series
28 Two-step RNA sequencing identifies a tissue-specific landscape of sense/antisense transcription (GSE28207) [HT Sequencing] AB SOLiD System 2.0 (Mus musculus) (GPL10279) University Clinic of Schleswig Holstein 2011-03-28 Mus musculus
Mus musculus
4
(0 x 4)
4 by_platform
by_series
29 Two-step RNA sequencing identifies a tissue-specific landscape of sense/antisense transcription (GSE28207) [HT Sequencing] AB SOLiD System 3.0 (Mus musculus) (GPL9318) University Clinic of Schleswig Holstein 2011-03-28 Mus musculus
Mus musculus
4
(0 x 4)
4 by_platform
by_series
30 Expression analysis of stepwise induction of iPS cells (GSE28197) [Bead Array] Illumina MouseRef-8 v2.0 expression beadchip (GPL6885) Washington University 2011-03-27 Mus musculus
Mus musculus
411,152
(25,697 x 16)
4 12 by_platform
by_series
31 Screening Hub Genes Related to the Recovery Phase of Irradiation Injury by Microarray Analysis Combined with Integrated Gene Network (GSE28195) [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) Shanghai Jiao Tong University 2011-03-27 Mus musculus
Mus musculus
226,405
(45,281 x 5)
5 by_platform
by_series
32 Expression data from normal murine mammary epithelial cell line NMuMG stimulated with TGF-beta (GSE28184) [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) University of Tokyo 2011-03-25 Mus musculus
Mus musculus
2,513,662
(1,256,831 x 2)
2 by_platform
by_series
33 Expression data from normal murine mammary epithelial cell line NMuMG stimulated with TGF-beta (GSE28184) [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [transcript (gene) version] (GPL6096) University of Tokyo 2011-03-25 Mus musculus
Mus musculus
567,904
(283,952 x 2)
2 by_platform
by_series
34 Seeking Gene Candidates Responsible for Developmental Origins of Health and Disease (DOHaD) (GSE28175) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version) (GPL4134) University of Tsukuba 2011-03-25 Mus musculus
Mus musculus
180,880
(45,220 x 4)
4 by_platform
by_series
35 Alteration of gene expression patterns in the liver and spleen following exposure to nucleoprotein diet in the mouse LPS injection model (GSE28176) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Feature Number version) (GPL4134) University of Tsukuba 2011-03-25 Mus musculus
Mus musculus
180,880
(45,220 x 4)
2 2 by_platform
by_series
36 Expression data from from the E9.25 hearts of mouse embryos (GSE28186) [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) Keio University School of Medicine 2011-03-25 Mus musculus
Mus musculus
180,404
(45,101 x 4)
4 by_platform
by_series
37 Deep sequencing-based expression transcriptional profiling of RAW264.7 infected with Brucella 16M (GSE28190) [Other] Jilin University Illumina DGE system (GPL13332) Jilin University 2011-03-25 Mus musculus
Mus musculus
52,809
(17,603 x 3)
3 by_platform
by_series
38 Psip1 ChIP using A300-847 antibody (Immunoprecipitates mainly p52 isoform of Psip1) Chip-chip from Mouse MEFs cells with H3K36me3, H3K4me3, Psip1 ChIP using A300-847 antibody (GSE28153) [Tiling Array] NimbleGen Custom Mouse Hox Tiling Array (GPL13276) MRC IGMM, University of Edinburgh 2011-03-24 Mus musculus
Mus musculus
1,794,930
(179,493 x 10)
10 by_platform
by_series
39 Novel age related alterations revealed by a comparative kinetic transcriptome analysis of naïve CD4+ and CD8+ T cells from young and old animals. (GSE28165) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version) (GPL7202) Mayo Clinic College of Medicine 2011-03-24 Mus musculus
Mus musculus
1,155,784
(41,278 x 28)
28 by_platform
by_series
40 Differential gene expression in the airway epithelium of beta6 ko mice chronically challenged with OVA (GSE28168) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version) (GPL7202) UCSF 2011-03-24 Mus musculus
Mus musculus
660,448
(41,278 x 16)
16 by_platform
by_series
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