Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(76)
  SAGE RsaI
(1)
  SAGE Sau3A
(10)
  MPSS
(5)
  GeneChip
(7,316)
  Tiling Array
(312)
  cDNA Array
(732)
  Oligo Array
(3,361)
  Bead Array
(1,268)
  Protein Array
(0)
  Antibody
(5)
  RT-PCR
(117)
  HT-Seq
(2,116)
  Other
(45)
  All
(15,364)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
41 MicroRNA expression profile in Dgcr8-homozygous mutant mouse embryonic stem cells (GSE20268) [Oligo Array] 3D-Gene Mouse miRNA Oligo chip v13.0 (GPL9967) Toray Industries,Inc. 2010-02-10 Mus musculus
Mus musculus
1,456
(728 x 2)
2 by_platform
by_series
42 Differential miroRNA expression in myostatin knockout mice (GSE49523) [Oligo Array] 3D-Gene Mouse miRNA Oligo chip v13.0 (GPL9967) Toray Industries,Inc. 2013-08-02 Mus musculus
Mus musculus
1,456
(728 x 2)
2 by_platform
by_series
43 Development and Preclinical Efficacy of Novel Transforming Growth Factor-β1 (TGFβ1) siRNAs for Pulmonary Fibrosis (GSE28122) [Oligo Array] 3D-Gene Mouse miRNA Oligo chip V14.1.0.1 (GPL13285) Toray Industries,Inc. 2011-03-23 Mus musculus
Mus musculus
6,651
(739 x 9)
9 by_platform
by_series
44 miRNAs expressed in murine CD4+ T cells of splenocyte and lamina propria lymphocytes (GSE40891) [Oligo Array] 3D-Gene Mouse miRNA Oligo chip V14.1.0.1 (GPL13285) Toray Industries,Inc. 2012-09-14 Mus musculus
Mus musculus
1,478
(739 x 2)
1 1 by_platform
by_series
45 Murine pulmonary arterial smooth muscle cells: Wild-type vs. NOX1 deficiency (miRNA profiling) (GSE42015) [Oligo Array] 3D-Gene Mouse miRNA Oligo chip V14.1.0.1 (GPL13285) Toray Industries,Inc. 2012-11-02 Mus musculus
Mus musculus
1,478
(739 x 2)
2 by_platform
by_series
46 Murine pulmonary arterial smooth muscle cells: Wild-type vs. NOX1 deficiency (GSE42016) [Oligo Array] 3D-Gene Mouse miRNA Oligo chip V14.1.0.1 (GPL13285) Toray Industries,Inc. 2012-11-02 Mus musculus
Mus musculus
1,478
(739 x 2)
2 by_platform
by_series
47 The DSIF subunits Spt4 and Spt5 have several unexpected, distinct roles in regulating immunoglobulin class switch recombination (GSE33206) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) Toray Industries,Inc. 2011-10-25 Mus musculus
Mus musculus
211,257
(23,473 x 9)
9 by_platform
by_series
48 mRNA and microRNA in spleens of miR-17~92 transgenic mice (GSE50559) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) The Ohio State University Wexner Medical Center 2013-09-03 Mus musculus
Mus musculus
211,257
(23,473 x 9)
9 by_platform
by_series
49 Tracing the conversion process for primordial germ cells to pluripotent stem cells (GSE37261) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) Toray Industries,Inc. 2012-04-13 Mus musculus
Mus musculus
187,784
(23,473 x 8)
8 by_platform
by_series
50 Downregulation of the Wnt antagonist Dkk2 links loss of Sept4 and myofibroblastic transformation of hepatic stellate cells (GSE24588) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) Kyoto Univ. 2010-10-07 Mus musculus
Mus musculus
140,838
(23,473 x 6)
6 by_platform
by_series
51 Identification of MVH target mRNA (GSE30144) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) University of California, Irvine 2011-06-22 Mus musculus
Mus musculus
140,838
(23,473 x 6)
6 by_platform
by_series
52 The histone chaperone Spt6 is required for AID target determination through H3K4me3 regulation (GSE35334) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) Toray Industries,Inc. 2012-01-25 Mus musculus
Mus musculus
140,838
(23,473 x 6)
6 by_platform
by_series
53 Metastable primordial germ cell-like state induced from mouse embryonic stem cells by Akt activation (GSE18813) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) Toray Industries,Inc. 2009-10-29 Mus musculus
Mus musculus
117,365
(23,473 x 5)
5 by_platform
by_series
54 IL7R: WT vs mutant in vitro and in vivo. (GSE51211) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) Toray Industries,Inc. 2013-09-26 Mus musculus
Mus musculus
117,365
(23,473 x 5)
1 1 3 by_platform
by_series
55 A Notch ligand, Delta-like 1 functions as an adhesion molecule for mast cells (GSE22659) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) Toray Industries,Inc. 2010-07-01 Mus musculus
Mus musculus
70,419
(23,473 x 3)
3 by_platform
by_series
56 LPS/GalN-induced liver injury model: wild-type vs. TMX-deficient mice (GSE28438) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) Toray Industries,Inc. 2011-04-06 Mus musculus
Mus musculus
70,419
(23,473 x 3)
3 by_platform
by_series
57 Interaction of Wnt signaling with Smad signaling during myogenic differentiation in mouse myoblast cells (GSE40456) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) Toray Industries,Inc. 2012-08-29 Mus musculus
Mus musculus
70,419
(23,473 x 3)
3 by_platform
by_series
58 Murine Colon26 cells: Primary vs. liver metastasis (GSE12162) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) Toray Industries, Inc. 2008-07-18 Mus musculus
Mus musculus
46,946
(23,473 x 2)
2 by_platform
by_series
59 Differentiational potency of induced pluripotent stem cells into cardiomyocytes (GSE18117) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) Kyoto university 2009-09-15 Mus musculus
Mus musculus
46,946
(23,473 x 2)
2 by_platform
by_series
60 Mouse adult testes: Total RNA vs. IP RNA (GSE27582) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) Toray Industries,Inc. 2011-03-01 Mus musculus
Mus musculus
46,946
(23,473 x 2)
2 by_platform
by_series
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