Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)
  Primates
(199)
  Rodents
(12,016)
  Mammals
(754)
  Vertebrates
(1,115)
  Invertebrates
(3,796)
  Plants
(6,479)
  Bacteria
(2,920)
  Viruses
(51)
  Phages
(4)
  Unclassified
(249)
  All
(45,516)
 
  SAGE NlaIII
(76)
  SAGE RsaI
(1)
  SAGE Sau3A
(10)
  MPSS
(5)
  GeneChip
(6,053)
  Tiling Array
(284)
  cDNA Array
(717)
  Oligo Array
(2,718)
  Bead Array
(888)
  Protein Array
(0)
  Antibody
(3)
  RT-PCR
(82)
  HT-Seq
(1,149)
  Other
(30)
  All
(12,016)
 
[1]      «      1   |   2   |   3   |   4   |   5      »      [601]
Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
41 Differentiational potency of induced pluripotent stem cells into cardiomyocytes (GSE18117) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) Kyoto university 2009-09-15 Mus musculus
Mus musculus
46,946
(23,473 x 2)
2 by_platform
by_series
42 Analysis of gene expression levels in BBF2H7-/- chondrocytes (GSE18052) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) Miyazaki university 2009-09-09 Mus musculus
Mus musculus
23,473
(23,473 x 1)
1 by_platform
by_series
43 Cells isolated from diaphragm of mdx mouse: satellite cells vs. PDGFRa+ cells (GSE25258) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) Toray Industries,Inc. 2010-11-10 Mus musculus
Mus musculus
23,473
(23,473 x 1)
1 by_platform
by_series
44 Wnt5a-deficient vs. wild-type E18 liver (GSE41803) [Oligo Array] 3D-Gene Mouse Oligo chip 24k (GPL5642) Toray Industries,Inc. 2012-10-23 Mus musculus
Mus musculus
23,473
(23,473 x 1)
1 by_platform
by_series
45 Target of Ascl1 in CG4 cell (GSE22157) [Oligo Array] 3D-Gene Rat Oligo chip 12k (GPL10470) Toray Industries,Inc. 2010-06-04 Rattus norvegicus
Rattus norvegicus
11,986
(11,986 x 1)
1 by_platform
by_series
46 Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68 (GSE22938) [HT Sequencing] 454 GS 20 (Mus musculus) (GPL9522) Max Planck Institute of Biochemistry 2010-07-14 Mus musculus
Mus musculus
4
(0 x 4)
2 2 by_platform
by_series
47 High throughput sequencing of RNAPII-Ser5P ChIP DNA (GSE18873) [HT Sequencing] 454 GS 20 (Mus musculus) (GPL9522) Genome Institute of Singapore 2009-11-03 Mus musculus
Mus musculus
1
(0 x 1)
1 by_platform
by_series
48 P6 Mouse Sertoli Cell Small RNA seq (GSE40692) [HT Sequencing] 454 GS 20 (Mus musculus) (GPL9522) University of Nevada, Reno 2012-09-07 Mus musculus
Mus musculus
1
(0 x 1)
1 by_platform
by_series
49 High-throughput semi-quantitative analysis of insertional mutations in heterogeneous tumors (GSE22657) [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) Netherlands Cancer Institute 2010-07-01 Mus musculus
Mus musculus
453
(0 x 453)
285 9 57 1 101 by_platform
by_series
50 Allelic imbalance sequencing reveals that single-nucleotide polymorphisms frequently alter microRNA-directed repression (GSE15675) [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) Samsung Medical Center 2009-04-15 Mus musculus
Mus musculus
12
(0 x 12)
3 9 by_platform
by_series
51 In vivo RNAi screening identifies regulators of actin dynamics as key determinants of lymphoma progression (GSE16090) [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) MIT 2009-05-13 Mus musculus
Mus musculus
7
(0 x 7)
7 by_platform
by_series
52 Deep-sequencing influences the results obtained in small-RNA sequencing (GSE35368) [HT Sequencing] 454 GS FLX (Mus musculus) (GPL9273) Institut Curie 2012-01-26 Mus musculus
Mus musculus
2
(0 x 2)
2 by_platform
by_series
53 Limitations and possibilities of small RNA digital gene expression profiling: library preparation comparison (454) (GSE16369) [HT Sequencing] 454 GS FLX (Rattus norvegicus) (GPL9412) Hubrecht Institute 2009-06-01 Rattus norvegicus
Rattus norvegicus
6
(0 x 6)
6 by_platform
by_series
54 Limitations and possibilities of small RNA digital gene expression profiling (GSE16374) [HT Sequencing] 454 GS FLX (Rattus norvegicus) (GPL9412) Hubrecht Institute 2009-06-01 Rattus norvegicus
Rattus norvegicus
6
(0 x 6)
6 by_platform
by_series
55 Developmentally regulated piRNA clusters implicate MILI in transposon control (GSE7414) [HT Sequencing] 454 sequencing of small RNAs from mouse (GPL5050) Cold Spring Harbor Laboratory 2007-03-30 Mus musculus
Mus musculus
136,417
(136,417 x 1)
1 by_platform
by_series
56 Endogenous shRNAs, siRNAs, and Other Microprocessor-independent, Dicer-dependent Small RNAs in Mouse ES Cells (GSE12521) [HT Sequencing] 454 small RNA sequencing (GPL7196) UCSF 2008-08-21 Mus musculus
Mus musculus
111,350
(55,675 x 2)
2 by_platform
by_series
57 Cross-platform comparability of microarray data (GSE2458) [cDNA Array] 5-Spotted cDNA/NIA (GPL1975) Paradigm Array Labs 2005-03-29 Mus musculus
Mus musculus
110,592
(13,824 x 8)
8 by_platform
by_series
58 Cross-platform comparability of microarray data (GSE2458) [Oligo Array] 6-Spotted Oligo/Compugen (GPL1976) Paradigm Array Labs 2005-03-29 Mus musculus
Mus musculus
60,192
(7,524 x 8)
8 by_platform
by_series
59 DNA vaccination series 1 (GSE1538) [cDNA Array] 6240 rat cDNA array (GPL541) Karolinska Institute 2004-07-02 Rattus norvegicus
Rattus norvegicus
37,440
(6,240 x 6)
6 by_platform
by_series
60 effect of age liver (GSE789) [cDNA Array] 6240 rat cDNA array (GPL541) Karolinska Institute 2003-10-31 Rattus norvegicus
Rattus norvegicus
24,960
(6,240 x 4)
4 by_platform
by_series
[1]      «      1   |   2   |   3   |   4   |   5      »      [601]