Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(718)
  SAGE RsaI
(3)
  SAGE Sau3A
(37)
  MPSS
(100)
  GeneChip
(108,928)
  Tiling Array
(2,164)
  cDNA Array
(11,311)
  Oligo Array
(60,928)
  Bead Array
(21,037)
  Protein Array
(0)
  Antibody
(28)
  RT-PCR
(1,166)
  HT-Seq
(17,667)
  Other
(968)
  All
(225,055)
 
  brain
(32,747)
  blood
(26,065)
  connective
(14,480)
  reproductive
(8,338)
  muscular
(14,417)
  digestive
(5,405)
  liver
(35,571)
  lung
(10,598)
  urinary
(5,877)
  endo/exo-crine
(7,366)
  embryo
(10,361)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(10,334)
  unclassified
(43,496)
  all
(225,055)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
61 GSM1037870 Tet1-/- rep1 0 University of California, San Diego 2012-11-15 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
testis Primordial germ cells
62 GSM1037871 Tet1-/- rep2 0 University of California, San Diego 2012-11-15 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
testis Primordial germ cells
63 GSM1037872 Tet1-/- rep3 0 University of California, San Diego 2012-11-15 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
testis Primordial germ cells
64 GSM1037873 Tet1-/- rep4 0 University of California, San Diego 2012-11-15 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
testis Primordial germ cells
65 GSM1037874 Tet1-/- rep5 0 University of California, San Diego 2012-11-15 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
testis Primordial germ cells
66 GSM1037875 WT rep1_2 0 University of California, San Diego 2012-11-15 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
testis Primordial germ cells
67 GSM1037876 WT rep2 0 University of California, San Diego 2012-11-15 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
testis Primordial germ cells
68 GSM1037877 WT rep3_2 0 University of California, San Diego 2012-11-15 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
testis Primordial germ cells
69 GSM1037878 WT rep4 0 University of California, San Diego 2012-11-15 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
testis Primordial germ cells
70 GSM1038105 WT uterus, pooled from n=3 0 Cincinnati Children's Hospital Medical Center 2012-11-16 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
uterus WT uterus
71 GSM1038106 Hoxa9,10,11-/- uterus, pooled from n=3 0 Cincinnati Children's Hospital Medical Center 2012-11-16 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
uterus Hoxa9,10,11-/- uterus
72 GSM1038107 Hoxd9,10,11-/- uterus, pooled from n=3 0 Cincinnati Children's Hospital Medical Center 2012-11-16 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
uterus Hoxd9,10,11-/- uterus
73 GSM1038108 Hoxa9,10,11-/-d9,10,11+/- uterus, pooled from n=3 0 Cincinnati Children's Hospital Medical Center 2012-11-16 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
uterus Hoxa9,10,11-/-d9,10,11+/- uterus
74 GSM1038109 Hoxa9,10,11+/-d9,10,11-/- uterus, pooled from n=3 0 Cincinnati Children's Hospital Medical Center 2012-11-16 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
uterus Hoxa9,10,11+/-d9,10,11-/- uterus
75 GSM1046827 Sperm Nucleosome replicate1 0 Friedrich Miescher Institute for Biomedical Research (FMI) 2012-11-29 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
testis Sperm
76 GSM1046828 Sperm Nucleosome replicate2 0 Friedrich Miescher Institute for Biomedical Research (FMI) 2012-11-29 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
testis Sperm
77 GSM1046829 Sperm H3.3 0 Friedrich Miescher Institute for Biomedical Research (FMI) 2012-11-29 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
testis Sperm
78 GSM1046830 Sperm H3.1/H3.2 replicate1 0 Friedrich Miescher Institute for Biomedical Research (FMI) 2012-11-29 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
testis Sperm
79 GSM1046831 Sperm H3.1/H3.2 replicate2 0 Friedrich Miescher Institute for Biomedical Research (FMI) 2012-11-29 [HT Sequencing] Illumina HiSeq 2000 (Mus musculus) (GPL13112) SRA Mus musculus
Mus musculus
testis Sperm
80 GSM1046832 Sperm H3K4me3 replicate1 0 Friedrich Miescher Institute for Biomedical Research (FMI) 2012-11-29 [HT Sequencing] Illumina Genome Analyzer IIx (Mus musculus) (GPL11002) SRA Mus musculus
Mus musculus
testis Sperm
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