Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(22,139)
  Primates
(288)
  Rodents
(15,364)
  Mammals
(970)
  Vertebrates
(1,364)
  Invertebrates
(4,819)
  Plants
(7,611)
  Bacteria
(3,409)
  Viruses
(59)
  Phages
(8)
  Unclassified
(433)
  All
(56,529)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(23)
  Tiling Array
(11)
  cDNA Array
(71)
  Oligo Array
(177)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(122)
  Other
(0)
  All
(433)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
41 Transcriptome Profiling of Xanthomonas oryzae pv. oryzae knockout mutants at different hybridization conditions and PMTs (GSE9643) [Oligo Array] UCD_Ronald_XOarray_5K_V1.0 (GPL6123) University of California, Davis 2007-11-19 unidentified
unidentified
362,880
(10,080 x 36)
36 by_platform
by_series
42 Gene expression profiling of HhAntag-treated pancreatic xenografts (GSE11981) [GeneChip] [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array (GPL1261) Genentech, Inc. 2008-07-03 Homo sapiens,Mus musculus
Homo sapiens,Mus musculus
360,808
(45,101 x 8)
8 by_platform
by_series
43 Mouse and zebrafish genes in vitro and in vivo (GSE32428) [Oligo Array] Agilent_44k_021626 (GPL14629) LUMC 2011-09-27 Mus musculus,Danio rerio
Mus musculus,Danio rerio
350,424
(43,803 x 8)
8 by_platform
by_series
44 Expression QTL mapping of Toxoplasma gondii genes, Tachyzoite array (GSE11514) [cDNA Array] Cambridge University Toxoplasma gondii 12k cDNA array (GPL6863) Stanford University School of Medicine 2008-05-20 Toxoplasma gondii,synthetic construct
Toxoplasma gondii,synthetic construct
344,064
(12,288 x 28)
28 by_platform
by_series
45 Expression QTL mapping of Toxoplasma gondii genes (GSE11515) [cDNA Array] Cambridge University Toxoplasma gondii 12k cDNA array (GPL6863) Stanford University School of Medicine 2008-05-20 Toxoplasma gondii,synthetic construct
Toxoplasma gondii,synthetic construct
344,064
(12,288 x 28)
28 by_platform
by_series
46 Genes expressed by the biological control bacterium Pseudomonas protegens Pf-5 on seed surfaces under the control of the global regulators GacA and RpoS (GSE38633) [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 28k v2.0 (GPL7621) USDA-ARS 2012-06-11 Pseudomonas,unidentified
Pseudomonas,unidentified
331,776
(27,648 x 12)
12 by_platform
by_series
47 Gene expression profiling to identify genes that are differentially expressed between murine MHCIIlo and MHCIIhi dendritic cell subpopulations [MHCIIhi vs. MHCIIlo] (GSE52771) [Oligo Array] Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version) (GPL7202) Genentech, Inc. 2013-11-26 Mus musculus,Homo sapiens
Mus musculus,Homo sapiens
330,224
(41,278 x 8)
8 by_platform
by_series
48 13-lined ground squirrel (Spermophilus tridecemlineatus) hibernating liver transcriptome (GSE2021) [cDNA Array] Spermophilus lateralis array Mk 1 (GPL1706) Stanford University 2004-11-29 unidentified
unidentified
326,976
(12,576 x 26)
26 by_platform
by_series
49 AMD3100 and G-CSF Mobilize Different CD34+ Cell Populations Based on Gene and miRNA Expression (GSE16936) [cDNA Array] CCDTM Homo sapiens 17.5k version 2.1 (GPL8793) Sidra Medical and Research Center 2009-07-02 Homo sapiens,Macaca mulatta
Homo sapiens,Macaca mulatta
302,094
(16,783 x 18)
18 by_platform
by_series
50 Golden-mantled ground squirrel (Spermophilus lateralis) hibernating brain transcriptome (GSE2022) [cDNA Array] Spermophilus lateralis array Mk 1 (GPL1706) Stanford University 2004-11-29 unidentified
unidentified
301,824
(12,576 x 24)
24 by_platform
by_series
51 Salmonella Typhimurium: Immobilized growth vs. Planktonic growth (GSE32995) [cDNA Array] SALSA 2 IFR Salmonella 8K Arrays (GPL13609) Technical University of Denmark 2011-10-14 unidentified
unidentified
298,368
(8,064 x 37)
37 by_platform
by_series
52 Gene expression in human vs chimpanzees (GSE1464) [cDNA Array] SHFC (GPL1710) Stanford Microarray Database (SMD) 2004-06-08 Pan troglodytes,Homo sapiens
Pan troglodytes,Homo sapiens
290,304
(41,472 x 7)
7 by_platform
by_series
53 Gene expression in human vs chimpanzees (GSE1464) [cDNA Array] SHFD (GPL1709) Stanford Microarray Database (SMD) 2004-06-08 Pan troglodytes,Homo sapiens
Pan troglodytes,Homo sapiens
290,304
(41,472 x 7)
7 by_platform
by_series
54 ROS homeostasis and pimaricin production in Streptomyces natalensis ATCC 27448 (GSE46537) [Oligo Array] Agilent-025954 Streptomyces avermitilis Matriz_JFA_V1 (GPL17101) IBMC 2013-05-01 Streptomyces natalensis,unidentified
Streptomyces natalensis,unidentified
283,392
(15,744 x 18)
18 by_platform
by_series
55 Inactivation of the GacA response regulator in Pseudomonas fluorescens Pf-5 has far-reaching transcriptomic consequences (GSE16898) [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620) Macquarie University 2009-06-30 Pseudomonas,unidentified
Pseudomonas,unidentified
278,784
(23,232 x 12)
12 by_platform
by_series
56 Thyroid hormone induced changes in Xenopus laevis tadpole limb bud (GSE3404) [Oligo Array] Carnegie Xenopus Laevis 22K Microarray v1.0 (60-mer Oligo) (GPL2901) NIH 2005-10-03 Xenopus laevis,unidentified
Xenopus laevis,unidentified
269,328
(22,444 x 12)
12 by_platform
by_series
57 Thyroid hormone induced resorption of tail in Xenopus laevis tadpole (GSE3405) [Oligo Array] Carnegie Xenopus Laevis 22K Microarray v1.0 (60-mer Oligo) (GPL2901) NIH 2005-10-03 Xenopus laevis,unidentified
Xenopus laevis,unidentified
269,328
(22,444 x 12)
12 by_platform
by_series
58 The transcriptome of the arbuscular mycorrhizal fungus Glomus intraradices (GSE29866) [MIXTURE] Glomus intraradices EST expression array (GPL13705) INRA 2011-06-09 Medicago truncatula,unidentified
Medicago truncatula,unidentified
268,848
(22,404 x 12)
2 3 3 4 by_platform
by_series
59 Time-course expression data during assurance of the chronological longevity by caloric restriction in budding yeast (GSE41860) [GeneChip] [Yeast_2] Affymetrix Yeast Genome 2.0 Array (GPL2529) Korea University 2012-10-26 Saccharomyces,unidentified
Saccharomyces,unidentified
262,272
(10,928 x 24)
24 by_platform
by_series
60 Role of putative RNA-binding proteins in Campylobacter jejuni gene expression and virulence (GSE35137) [Oligo Array] Agilent-019568 Campylobacter 11168 expression array_1_Of_1 (GPL13841) Institute of Food Research 2012-01-17 Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified
251,904
(15,744 x 16)
16 by_platform
by_series
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