Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(18,625)		   Primates
(206)		   Rodents
(12,612)		   Mammals
(782)		   Vertebrates
(1,156)		   Invertebrates
(4,045)		   Plants
(6,642)		   Bacteria
(2,980)		   Viruses
(50)		   Phages
(4)		   Unclassified
(287)		   All
(47,440)		  
  SAGE NlaIII
(0)		   SAGE RsaI
(0)		   SAGE Sau3A
(0)		   MPSS
(0)		   GeneChip
(14)		   Tiling Array
(9)		   cDNA Array
(61)		   Oligo Array
(113)		   Bead Array
(4)		   Protein Array
(0)		   Antibody
(0)		   RT-PCR
(0)		   HT-Seq
(62)		   Other
(23)		   All
(287)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
41 Gene expression in human vs chimpanzees (GSE1464) [cDNA Array] SHFC (GPL1710) Stanford Microarray Database (SMD) 2004-06-08 Pan troglodytes,Homo sapiens
Pan troglodytes,Homo sapiens		 290,304
(41,472 x 7) 		7 by_platform
by_series
42 Gene expression in human vs chimpanzees (GSE1464) [cDNA Array] SHFD (GPL1709) Stanford Microarray Database (SMD) 2004-06-08 Pan troglodytes,Homo sapiens
Pan troglodytes,Homo sapiens		 290,304
(41,472 x 7) 		7 by_platform
by_series
43 Inactivation of the GacA response regulator in Pseudomonas fluorescens Pf-5 has far-reaching transcriptomic consequences (GSE16898) [Oligo Array] JCVI Pseudomonas fluorescens Pf-5 23k v1.0 (GPL7620) Macquarie University 2009-06-30 Pseudomonas,unidentified
Pseudomonas,unidentified		 278,784
(23,232 x 12) 		12 by_platform
by_series
44 Thyroid hormone induced changes in Xenopus laevis tadpole limb bud (GSE3404) [Oligo Array] Carnegie Xenopus Laevis 22K Microarray v1.0 (60-mer Oligo) (GPL2901) NIH 2005-10-03 Xenopus laevis,unidentified
Xenopus laevis,unidentified		 269,328
(22,444 x 12) 		12 by_platform
by_series
45 Thyroid hormone induced resorption of tail in Xenopus laevis tadpole (GSE3405) [Oligo Array] Carnegie Xenopus Laevis 22K Microarray v1.0 (60-mer Oligo) (GPL2901) NIH 2005-10-03 Xenopus laevis,unidentified
Xenopus laevis,unidentified		 269,328
(22,444 x 12) 		12 by_platform
by_series
46 The transcriptome of the arbuscular mycorrhizal fungus Glomus intraradices (GSE29866) [MIXTURE] Glomus intraradices EST expression array (GPL13705) INRA 2011-06-09 Medicago truncatula,unidentified
Medicago truncatula,unidentified		 268,848
(22,404 x 12) 		2 3 3 4 by_platform
by_series
47 Role of putative RNA-binding proteins in Campylobacter jejuni gene expression and virulence (GSE35137) [Oligo Array] Agilent-019568 Campylobacter 11168 expression array_1_Of_1 (GPL13841) Institute of Food Research 2012-01-17 Campylobacter jejuni subsp. jejuni,unidentified
Campylobacter jejuni subsp. jejuni,unidentified		 251,904
(15,744 x 16) 		16 by_platform
by_series
48 Spalax gene expression profiling of muscle and brain under hypoxia (GSE37619) [Oligo Array] University of Illinois/Haifa University Spalax galili Agilent 8x15K microarray (GPL15478) University of Illinois 2012-04-26 Nannospalax,unidentified
Nannospalax,unidentified		 244,112
(15,257 x 16) 		8 8 by_platform
by_series
49 Analysis of molecular signatures in mammalian hibernation (GSE38700) [cDNA Array] Urocitellus parryii 9.6k (GPL15674) CAS-MPG partner institute for computational biology 2012-06-13 unidentified
unidentified		 230,400
(9,600 x 24) 		24 by_platform
by_series
50 Human mesenchymal stem cell-derived matrices for enhanced osteoregeneration (GSE35503) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Texas A&M 2012-02-02 Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 218,700
(54,675 x 4) 		4 by_platform
by_series
51 Ethanol treated vs paired control (GSE2718) [cDNA Array] TJU-DBI Rat array v1 (GPL2000) Thomas Jefferson University 2005-05-27 unidentified,Rattus norvegicus
unidentified,Rattus norvegicus		 217,728
(18,144 x 12) 		12 by_platform
by_series
52 Gene expression in human vs chimpanzees (GSE1464) [cDNA Array] SHFB (GPL1711) Stanford Microarray Database (SMD) 2004-06-08 Pan troglodytes,Homo sapiens
Pan troglodytes,Homo sapiens		 207,360
(41,472 x 5) 		5 by_platform
by_series
53 Responses of tobacco BY-2 cells to boron deprivation (GSE37649) [cDNA Array] RIKEN 16K tobacco cDNA microarray (Slide1B) (GPL4707) Kyoto University 2012-04-29 Nicotiana tabacum,synthetic construct
Nicotiana tabacum,synthetic construct		 202,752
(9,216 x 22) 		22 by_platform
by_series
54 Responses of tobacco BY-2 cells to boron deprivation (GSE37649) [cDNA Array] RIKEN 16K tobacco cDNA microarray (Slide2B) (GPL4708) Kyoto University 2012-04-29 Nicotiana tabacum,synthetic construct
Nicotiana tabacum,synthetic construct		 202,752
(9,216 x 22) 		22 by_platform
by_series
55 Responses of tobacco BY-2 cells to boron deprivation (GSE37649) [cDNA Array] RIKEN 16K tobacco cDNA microarray (Slide3A) (GPL4709) Kyoto University 2012-04-29 Nicotiana tabacum,synthetic construct
Nicotiana tabacum,synthetic construct		 202,752
(9,216 x 22) 		22 by_platform
by_series
56 Thyroid hormone induced changes in Xenopus laevis tadpole brain (GSE3402) [Oligo Array] Carnegie Xenopus Laevis 22K Microarray v1.0 (60-mer Oligo) (GPL2901) NIH 2005-10-03 Xenopus laevis,unidentified
Xenopus laevis,unidentified		 201,996
(22,444 x 9) 		9 by_platform
by_series
57 Transcriptome inheritance of a citrus somatic hybrid (GSE18386) [cDNA Array] Citrus 22k cDNA microarray v1 (GPL8769) Instituto Valenciano de Investigaciones Agrarias (IVIA) 2009-10-02 Citrus limon,unidentified
Citrus limon,unidentified		 199,584
(22,176 x 9) 		6 3 by_platform
by_series
58 Gene expression profiling of tumor stroma of MCF7 breast cancer xenografts overexpressing podoplanin (mouse array) (GSE14551) [Oligo Array] ABI Mouse Genome Survey Microarray (GPL2995) ETH Zurich 2009-01-23 Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 198,072
(33,012 x 6) 		6 by_platform
by_series
59 Gene expression profiling of MCF7 breast cancer xenografts overexpressing podoplanin (GSE14552) [Oligo Array] ABI Mouse Genome Survey Microarray (GPL2995) ETH Zurich 2009-01-23 Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 198,072
(33,012 x 6) 		6 by_platform
by_series
60 Gene expression profiling of MCF7 breast cancer xenografts overexpressing podoplanin (human array) (GSE14550) [Oligo Array] ABI Human Genome Survey Microarray Version 2 (GPL2986) ETH Zurich 2009-01-23 Homo sapiens,Mus musculus
Homo sapiens,Mus musculus		 197,268
(32,878 x 6) 		6 by_platform
by_series
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