Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(836)
  Primates
(10)
  Rodents
(586)
  Mammals
(39)
  Vertebrates
(49)
  Invertebrates
(184)
  Plants
(231)
  Bacteria
(113)
  Viruses
(2)
  Phages
(0)
  Unclassified
(8)
  All
(2,065)
 
  SAGE NlaIII
(1)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(4)
  Tiling Array
(1)
  cDNA Array
(3)
  Oligo Array
(34)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(6)
  Other
(0)
  All
(49)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
21 Identification and differential expression of microRNAs during metamorphosis in the Japanese flounder (Paralichthys olivaceus) (GSE27986) [Oligo Array] SHOU miRNA Fishes 1K (GPL13286) Shanghai Ocean University 2011-03-16 Paralichthys olivaceus
Paralichthys olivaceus
1,974
(987 x 2)
2 by_platform
by_series
22 Genome expression profile of early response to photobacteriosis in gilthead sea bream (Sparus aurata) (GSE26651) [Oligo Array] University of Padova_Sparus aurata_4x44K_v2.0 (GPL11489) University of Padova 2011-01-15 Sparus aurata
Sparus aurata
705,088
(44,068 x 16)
16 by_platform
by_series
23 Genes for embryo development are packaged in blocks of multivalent chromatin in zebrafish sperm (GSE26609) [Oligo Array] Zebrafish 12kb promoter 244K array_slide 2 of 2 (GPL6601) University of Utah 2011-01-13 Danio rerio
Danio rerio
3,183,174
(176,843 x 18)
16 2 by_platform
by_series
24 Genes for embryo development are packaged in blocks of multivalent chromatin in zebrafish sperm (GSE26609) [Oligo Array] Zebrafish 12kb promoter 244K array_slide 1 of 2 (GPL6600) University of Utah 2011-01-13 Danio rerio
Danio rerio
3,163,428
(175,746 x 18)
16 2 by_platform
by_series
25 Genes for embryo development are packaged in blocks of multivalent chromatin in zebrafish sperm (GSE26609) [Oligo Array] Agilent-015064 D. rerio (Zebrafish) Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7302) University of Utah 2011-01-13 Danio rerio
Danio rerio
43,140
(21,570 x 2)
2 by_platform
by_series
26 Gene expression in three different chicken lines after Salmonella infection early in life (GSE27069) [Oligo Array] ARK-Genomics G. gallus 20K v1.0 (GPL5480) Wageningen UR 2011-02-04 Gallus gallus
Gallus gallus
842,688
(22,176 x 38)
38 by_platform
by_series
27 Gallus gallus Control Versus SU5402, LY294002 or U0126 Treated Preingression Epiblast from Gastrula Stage Embryos (GSE27403) [Oligo Array] Arizona Gallus gallus 20.7K Oligo Array v1.5 (GPL13191) University of Arizona 2011-02-18 Gallus gallus
Gallus gallus
84,480
(21,120 x 4)
4 by_platform
by_series
28 Expression Analysis of Trimethyltin Chlorides (TMT) Impact on Embryonic Development (GSE28131) [Oligo Array] NimbleGen Danio rerio 12x135K Arrays [090818_Zv7_EXPR] (GPL13318) Oregon State University 2011-03-23 Danio rerio
Danio rerio
461,880
(38,490 x 12)
12 by_platform
by_series
29 Effects of the total replacement of fish meal and fish oil with plant protein and oil sources on the hepatic transcriptome of two European sea bass (Dicentrarchus labrax) sub-families exhibiting different growth potentials on an all plant-based diet (GSE27649) [Oligo Array] University of Padova_Dicentrarchus labrax_4x44K array_v1.0 (GPL9663) Ifremer 2011-03-02 Dicentrarchus labrax
Dicentrarchus labrax
947,688
(39,487 x 24)
24 by_platform
by_series
30 Effects of a short-term exposure to the fungicide prochloraz on endocrine function and gene expression in female fathead minnows (Pimephales promelas) (GSE26958) [Oligo Array] Agilent-019597 FHM_Denslow_8x15K [Feature Number version] (GPL9248) Mississippi State University 2011-01-30 Pimephales promelas
Pimephales promelas
362,112
(15,744 x 23)
23 by_platform
by_series
31 Differential cardiac gene expression in genetically selected turkeys (GSE27147) [Oligo Array] Turkey skeletal muscle long oligonucleotide (TSKMLO) microarray (GPL9788) University of Minnesota 2011-02-08 Meleagris gallopavo
Meleagris gallopavo
49,152
(12,288 x 4)
4 by_platform
by_series
32 Diet study with EE2 in liver of female largemouth bass (LMB) (GSE28143) [Oligo Array] LMB microarray 15K (Agilent format) (GPL13229) University of Florida 2011-03-23 Micropterus salmoides
Micropterus salmoides
197,704
(15,208 x 13)
13 by_platform
by_series
33 Comparison of genomic, morphological, and behavioral responses among fathead minnow (Pimephales promelas ) and zebrafish (Danio rerio) to acute RDX exposure (GSE27067) [Oligo Array] Agilent-019161 D. rerio (Zebrafish) Oligo Microarray (V2) G2519F (Probe Name version) (GPL7301) US Army Engineer Research and Development Center 2011-02-04 Danio rerio
Danio rerio
1,048,248
(43,677 x 24)
24 by_platform
by_series
34 Comparison of genomic, morphological, and behavioral responses among fathead minnow (Pimephales promelas ) and zebrafish (Danio rerio) to acute RDX exposure (GSE27067) [Oligo Array] Agilent-019597 custom fathead minnow 60mer (8x15k) (GPL10259) US Army Engineer Research and Development Center 2011-02-04 Pimephales promelas
Pimephales promelas
534,380
(15,268 x 35)
35 by_platform
by_series
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