Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(73)
  cDNA Array
(102)
  Oligo Array
(1,162)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(95)
  Other
(0)
  All
(1,432)
 
  brain
(12)
  blood
(278)
  connective
(421)
  reproductive
(0)
  muscular
(0)
  digestive
(1)
  liver
(0)
  lung
(60)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(1)
  unclassified
(659)
  all
(1,432)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
461 GSM281943 April 2007 Sewage sample hybridization unto virus microarray 10,848 Rose_Lab@MSU 2008-04-16 [Oligo Array] MSU_Rose_Env_Vir_v3 (GPL6501) mixed Viruses
Viruses
unclassified source_name:April 2007 Sewage sample, Cy 3 Labeled virus DNA extracted from Cell culture on BGM cells April 2007 Sewage sample, Cy 5 Labeled virus RNA extracted from Cell culture on BGM cells title:April 2007 Sewage sample hybridization unto virus microarray description:Arrays were scanned and washed at several different wash temperatures to ensure that probe signals behaved appropriately and were not artifacts of the hybridization.
462 GSM459220 Aphid 90 min - Combined data (3 reps) 385 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.2 (GPL9292) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:aphidicolin-treated Chlorella NC64A infected with PBCV-1 title:Aphid 90 min - Combined data (3 reps) description:4 technical replicate, 3 independent biological replicates
463 GSM459219 Aphid 60 min - Combined data (3 reps) 385 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.2 (GPL9292) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:aphidicolin-treated Chlorella NC64A infected with PBCV-1 title:Aphid 60 min - Combined data (3 reps) description:4 technical replicate, 3 independent biological replicates
464 GSM459218 Aphid 40 min - Combined data (3 reps) 385 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.2 (GPL9292) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:aphidicolin-treated Chlorella NC64A infected with PBCV-1 title:Aphid 40 min - Combined data (3 reps) description:4 technical replicate, 3 independent biological replicates
465 GSM459223 Aphid 360 min - Combined data (3 reps) 385 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.2 (GPL9292) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:aphidicolin-treated Chlorella NC64A infected with PBCV-1 title:Aphid 360 min - Combined data (3 reps) description:4 technical replicate, 3 independent biological replicates
466 GSM459222 Aphid 240 min - Combined data (3 reps) 385 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.2 (GPL9292) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:aphidicolin-treated Chlorella NC64A infected with PBCV-1 title:Aphid 240 min - Combined data (3 reps) description:4 technical replicate, 3 independent biological replicates
467 GSM459217 Aphid 20 min - Combined data (3 reps) 385 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.2 (GPL9292) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:aphidicolin-treated Chlorella NC64A infected with PBCV-1 title:Aphid 20 min - Combined data (3 reps) description:4 technical replicate, 3 independent biological replicates
468 GSM459221 Aphid 120 min - Combined data (3 reps) 385 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.2 (GPL9292) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:aphidicolin-treated Chlorella NC64A infected with PBCV-1 title:Aphid 120 min - Combined data (3 reps) description:4 technical replicate, 3 independent biological replicates
469 GSM534901 Angola marburgvirus-242 14,864 Washington University in St. Louis, School of Medicine 2010-04-20 [cDNA Array] Hemorrhagic Fever Microarray Release I (V2.10HF) (GPL10345) RNA Lake Victoria marburgvirus - Angola2005
Lake Victoria marburgvirus - Angola2005
unclassified source_name:infected culture title:Angola marburgvirus-242 description:hybridization of infected culture for use in testing the performance of VIPR
470 GSM534879 Angola marburgvirus-218 14,864 Washington University in St. Louis, School of Medicine 2010-04-20 [cDNA Array] Hemorrhagic Fever Microarray Release I (V2.10HF) (GPL10345) RNA Lake Victoria marburgvirus - Angola2005
Lake Victoria marburgvirus - Angola2005
unclassified source_name:infected culture title:Angola marburgvirus-218 description:hybridization of infected culture for use in testing the performance of VIPR
471 GSM534946 Amapari virus-473 14,864 Washington University in St. Louis, School of Medicine 2010-04-20 [cDNA Array] Hemorrhagic Fever Microarray Release I (V2.10HF) (GPL10345) RNA Amapari virus
Amapari virus
unclassified source_name:infected culture title:Amapari virus-473 description:hybridization of infected culture for use in testing the performance of VIPR
472 GSM534939 Amapari virus-451 14,864 Washington University in St. Louis, School of Medicine 2010-04-20 [cDNA Array] Hemorrhagic Fever Microarray Release I (V2.10HF) (GPL10345) RNA Amapari virus
Amapari virus
unclassified source_name:infected culture title:Amapari virus-451 description:hybridization of infected culture for use in testing the performance of VIPR
473 GSM843862 Ago 2 immunoprecipitated RNA extracted from HHV-6 infected Sup-T-1 cells 0 CNRS - Institut de Biologie Moléculaire et Cellulaire (IBMC) 2011-12-06 [HT Sequencing] Illumina Genome Analyzer IIx (Human herpesvirus 6B) (GPL14966) SRA Human herpesvirus 6B
Human herpesvirus 6B
unclassified source_name:Ago 2 immunoprecipitated RNA extracted from HHV-6 infected Sup-T-1 cells title:Ago 2 immunoprecipitated RNA extracted from HHV-6 infected Sup-T-1 cells
474 GSM608710 Adeno_1 64,533 Lawrence Livermore National Laboratory 2010-10-14 [Oligo Array] Lawrence Livermore Microbial Detection Array version 1 (GPL11053) genomic Human adenovirus 7
Human adenovirus 7
unclassified source_name:Adenovirus type 7 strain Gomen title:Adeno_1 description:Adenovirus type 7 strain Gomen Cy3 9mer
475 GSM459204 90 min - Replicate 4 (III) 400 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (III) title:90 min - Replicate 4 (III) description:Technical replicate 4 of 4 (Biological replicate 3 of 3)
476 GSM459176 90 min - Replicate 4 (II) 400 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (II) title:90 min - Replicate 4 (II) description:Technical replicate 4 of 4 (Biological replicate 2 of 3)
477 GSM459148 90 min - Replicate 4 (I) 400 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (I) title:90 min - Replicate 4 (I) description:Technical replicate 4 of 4 (Biological replicate 1 of 3)
478 GSM459203 90 min - Replicate 3 (III) 400 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (III) title:90 min - Replicate 3 (III) description:Technical replicate 3 of 4 (Biological replicate 3 of 3)
479 GSM459175 90 min - Replicate 3 (II) 400 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (II) title:90 min - Replicate 3 (II) description:Technical replicate 3 of 4 (Biological replicate 2 of 3)
480 GSM459147 90 min - Replicate 3 (I) 400 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (I) title:90 min - Replicate 3 (I) description:Technical replicate 3 of 4 (Biological replicate 1 of 3)
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