Gene Expression Omnibus (GEO) Overview

DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

Viruses
(1,263)

Phages
(101)

Unclassified
(5,497)

All
(931,947)

SAGE NlaIII
(0)

SAGE RsaI
(0)

SAGE Sau3A
(0)

MPSS
(0)

GeneChip
(0)

Tiling Array
(40)

cDNA Array
(102)

Oligo Array
(1,054)

Bead Array
(0)

Protein Array
(0)

Antibody
(0)

RT-PCR
(0)

HT-Seq
(67)

Other
(0)

All
(1,263)

brain
(12)

blood
(274)

connective
(420)

reproductive
(0)

muscular
(0)

digestive
(1)

liver
(0)

lung
(28)

urinary
(0)

endo/exo-crine
(0)

embryo
(0)

adult aerial structure
(0)

young aerial structure
(0)

root
(0)

meristem/growing tissue
(0)

flower/sexual organ
(0)

seed/fruit/grain
(0)

pooled
(1)

unclassified
(527)

all
(1,263)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
501	GSM459150	120 min - Replicate 2 (I)	400	University of Nebraska-Lincoln	2009-10-06	[Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291)	RNA	Paramecium bursaria Chlorella virus 1	unclassified	source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (I) title:120 min - Replicate 2 (I) description:Technical replicate 2 of 4 (Biological replicate 1 of 3)
502	GSM459205	120 min - Replicate 1 (III)	400	University of Nebraska-Lincoln	2009-10-06	[Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291)	RNA	Paramecium bursaria Chlorella virus 1	unclassified	source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (III) title:120 min - Replicate 1 (III) description:Technical replicate 1 of 4 (Biological replicate 3 of 3)
503	GSM459177	120 min - Replicate 1 (II)	400	University of Nebraska-Lincoln	2009-10-06	[Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291)	RNA	Paramecium bursaria Chlorella virus 1	unclassified	source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (II) title:120 min - Replicate 1 (II) description:Technical replicate 1 of 4 (Biological replicate 2 of 3)
504	GSM459149	120 min - Replicate 1 (I)	400	University of Nebraska-Lincoln	2009-10-06	[Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291)	RNA	Paramecium bursaria Chlorella virus 1	unclassified	source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (I) title:120 min - Replicate 1 (I) description:Technical replicate 1 of 4 (Biological replicate 1 of 3)
505	GSM368412	12 hpi	310	University of Guelph	2009-02-06	[Oligo Array] University of Guelph, 1152 CfMNPV genes array version 1 (GPL8039)	mixed	Choristoneura fumiferana MNPV	unclassified	source_name:vgDNA, 12 hpi cDNA, 12 hpi title:12 hpi description:Temporal expression profiles of all 146 ORFs, and their complements, of Choristoneura fumiferana nucleopolyhedrovirus (CfMNPV) were determined by a modified oligonucleotide based two-channel DNA microarray. Total RNA was isolated at different times post infection from Cf203 insect cells infected with CfMNPV. The cDNA was synthesized, fluorescently labeled with Cy3, and co-hybridized to the microarray chips along with Cy5-labeled CfMNPV viral genomic DNA (vgDNA), which was used as an equimolar reference standard for each gene.
506	GSM40809	10_07_03_HRV26	12,504	University of California, San Francisco	2005-02-02	[Oligo Array] MegaViroP1-P7 (GPL1834)	RNA	Viruses	unclassified	source_name:HRV26 cutlure title:10_07_03_HRV26 description:Amplified RNA from Human rhinovirus 26
507	GSM40811	10_07_03_HRV16	12,504	University of California, San Francisco	2005-02-02	[Oligo Array] MegaViroP1-P7 (GPL1834)	RNA	Viruses	unclassified	source_name:HRV16 culture title:10_07_03_HRV16 description:Amplified RNA from Human rhinovirus 16
508	GSM368408	1 hpi	310	University of Guelph	2009-02-06	[Oligo Array] University of Guelph, 1152 CfMNPV genes array version 1 (GPL8039)	mixed	Choristoneura fumiferana MNPV	unclassified	source_name:vgDNA, 1hpi cDNA, 1hpi title:1 hpi description:Temporal expression profiles of all 146 ORFs, and their complements, of Choristoneura fumiferana nucleopolyhedrovirus (CfMNPV) were determined by a modified oligonucleotide based two-channel DNA microarray. Total RNA was isolated at different times post infection from Cf203 insect cells infected with CfMNPV. The cDNA was synthesized, fluorescently labeled with Cy3, and co-hybridized to the microarray chips along with Cy5-labeled CfMNPV viral genomic DNA (vgDNA), which was used as an equimolar reference standard for each gene.
509	GSM40818	04_10_04_HRV60	12,504	University of California, San Francisco	2005-02-02	[Oligo Array] MegaViroP1-P7 (GPL1834)	RNA	Viruses	unclassified	source_name:HRV60 culture title:04_10_04_HRV60 description:Amplified RNA from Human rhinovirus 60
510	GSM40815	04_10_04_HRV55	12,504	University of California, San Francisco	2005-02-02	[Oligo Array] MegaViroP1-P7 (GPL1834)	RNA	Viruses	unclassified	source_name:HRV55 culture title:04_10_04_HRV55 description:Amplified RNA from Human rhinovirus 55
511	GSM40812	04_10_04_HRV29	12,504	University of California, San Francisco	2005-02-02	[Oligo Array] MegaViroP1-P7 (GPL1834)	RNA	Viruses	unclassified	source_name:HRV29 culture title:04_10_04_HRV29 description:Amplified RNA from Human rhinovirus 29
512	GSM40810	04_10_04_HRV28	12,504	University of California, San Francisco	2005-02-02	[Oligo Array] MegaViroP1-P7 (GPL1834)	RNA	Viruses	unclassified	source_name:HRV28 culture title:04_10_04_HRV28 description:Amplified RNA from Human rhinovirus 28
513	GSM40834	04_10_04_HRV22	12,504	University of California, San Francisco	2005-02-02	[Oligo Array] MegaViroP1-P7 (GPL1834)	RNA	Viruses	unclassified	source_name:HRV22 culture title:04_10_04_HRV22 description:Amplified RNA from Human rhinovirus 22
514	GSM40833	04_10_04_HRV10	12,504	University of California, San Francisco	2005-02-02	[Oligo Array] MegaViroP1-P7 (GPL1834)	RNA	Viruses	unclassified	source_name:HRV10 culture title:04_10_04_HRV10 description:Amplified RNA from Human rhinovirus 10
515	GSM40859	04_07_04_HRV83	12,504	University of California, San Francisco	2005-02-02	[Oligo Array] MegaViroP1-P7 (GPL1834)	RNA	Viruses	unclassified	source_name:HRV83 culture title:04_07_04_HRV83 description:Amplified RNA from Human rhinovirus 83
516	GSM40830	04_07_04_HRV80	12,504	University of California, San Francisco	2005-02-02	[Oligo Array] MegaViroP1-P7 (GPL1834)	RNA	Viruses	unclassified	source_name:HRV80 culture title:04_07_04_HRV80 description:Amplified RNA from Human rhinovirus 80
517	GSM40827	04_07_04_HRV70	12,504	University of California, San Francisco	2005-02-02	[Oligo Array] MegaViroP1-P7 (GPL1834)	RNA	Viruses	unclassified	source_name:HRV70 culture title:04_07_04_HRV70 description:Amplified RNA from Human rhinovirus 70
518	GSM40855	04_07_04_HRV65	12,504	University of California, San Francisco	2005-02-02	[Oligo Array] MegaViroP1-P7 (GPL1834)	RNA	Viruses	unclassified	source_name:HRV65 culture title:04_07_04_HRV65 description:Amplified RNA from Human rhinovirus 65
519	GSM40826	04_07_04_HRV4	12,504	University of California, San Francisco	2005-02-02	[Oligo Array] MegaViroP1-P7 (GPL1834)	RNA	Viruses	unclassified	source_name:HRV4 culture title:04_07_04_HRV4 description:Amplified RNA from Human rhinovirus 4
520	GSM40824	03_31_04_HRV8	12,504	University of California, San Francisco	2005-02-02	[Oligo Array] MegaViroP1-P7 (GPL1834)	RNA	Viruses	unclassified	source_name:HRV8 culture title:03_31_04_HRV8 description:Amplified RNA from Human rhinovirus 8

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