Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(73)
  cDNA Array
(102)
  Oligo Array
(1,162)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(95)
  Other
(0)
  All
(1,432)
 
  brain
(12)
  blood
(278)
  connective
(421)
  reproductive
(0)
  muscular
(0)
  digestive
(1)
  liver
(0)
  lung
(60)
  urinary
(0)
  endo/exo-crine
(0)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(1)
  unclassified
(659)
  all
(1,432)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
521 GSM459199 60 min - Replicate 3 (III) 400 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (III) title:60 min - Replicate 3 (III) description:Technical replicate 3 of 4 (Biological replicate 3 of 3)
522 GSM459171 60 min - Replicate 3 (II) 400 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (II) title:60 min - Replicate 3 (II) description:Technical replicate 3 of 4 (Biological replicate 2 of 3)
523 GSM459143 60 min - Replicate 3 (I) 400 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (I) title:60 min - Replicate 3 (I) description:Technical replicate 3 of 4 (Biological replicate 1 of 3)
524 GSM459198 60 min - Replicate 2 (III) 400 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (III) title:60 min - Replicate 2 (III) description:Technical replicate 2 of 4 (Biological replicate 3 of 3)
525 GSM459170 60 min - Replicate 2 (II) 400 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (II) title:60 min - Replicate 2 (II) description:Technical replicate 2 of 4 (Biological replicate 2 of 3)
526 GSM459142 60 min - Replicate 2 (I) 400 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (I) title:60 min - Replicate 2 (I) description:Technical replicate 2 of 4 (Biological replicate 1 of 3)
527 GSM459197 60 min - Replicate 1 (III) 400 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (III) title:60 min - Replicate 1 (III) description:Technical replicate 1 of 4 (Biological replicate 3 of 3)
528 GSM459169 60 min - Replicate 1 (II) 400 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (II) title:60 min - Replicate 1 (II) description:Technical replicate 1 of 4 (Biological replicate 2 of 3)
529 GSM459141 60 min - Replicate 1 (I) 400 University of Nebraska-Lincoln 2009-10-06 [Oligo Array] Paramecium bursaria Chlorella Virus-1 (PBCV-1) oligo array, v.1.0 (GPL9291) RNA Paramecium bursaria Chlorella virus 1
Paramecium bursaria Chlorella virus 1
unclassified source_name:Chlorella NC64A infected with PBCV-1 (MOI=5) RNA control (I) title:60 min - Replicate 1 (I) description:Technical replicate 1 of 4 (Biological replicate 1 of 3)
530 GSM368410 6 hpi 310 University of Guelph 2009-02-06 [Oligo Array] University of Guelph, 1152 CfMNPV genes array version 1 (GPL8039) mixed Choristoneura fumiferana MNPV
Choristoneura fumiferana MNPV
unclassified source_name:vgDNA, 6 hpi cDNA, 6 hpi title:6 hpi description:Temporal expression profiles of all 146 ORFs, and their complements, of Choristoneura fumiferana nucleopolyhedrovirus (CfMNPV) were determined by a modified oligonucleotide based two-channel DNA microarray. Total RNA was isolated at different times post infection from Cf203 insect cells infected with CfMNPV. The cDNA was synthesized, fluorescently labeled with Cy3, and co-hybridized to the microarray chips along with Cy5-labeled CfMNPV viral genomic DNA (vgDNA), which was used as an equimolar reference standard for each gene.
531 GSM468728 5' NCR from HCV isolated at week 27 from 4x0514 rep2 0 Santaris Pharma 2009-11-06 [HT Sequencing] 454 GS FLX (Hepatitis C virus) (GPL9540) SRA Hepatitis C virus
Hepatitis C virus
unclassified source_name:HCV-from-4x0514_week27 title:5' NCR from HCV isolated at week 27 from 4x0514 rep2 description:4x0514-11-26-08
532 GSM468720 5' NCR from HCV isolated at week 27 from 4x0514 rep1 0 Santaris Pharma 2009-11-06 [HT Sequencing] 454 GS FLX (Hepatitis C virus) (GPL9540) SRA Hepatitis C virus
Hepatitis C virus
unclassified source_name:HCV-from-4x0514_week27 title:5' NCR from HCV isolated at week 27 from 4x0514 rep1 description:4x0514-11-26-08
533 GSM468724 5' NCR from HCV isolated at week 27 from 4x0513 rep2 0 Santaris Pharma 2009-11-06 [HT Sequencing] 454 GS FLX (Hepatitis C virus) (GPL9540) SRA Hepatitis C virus
Hepatitis C virus
unclassified source_name:HCV-from-4x0513_week27 title:5' NCR from HCV isolated at week 27 from 4x0513 rep2 description:4x0513-11-26-08
534 GSM468716 5' NCR from HCV isolated at week 27 from 4x0513 rep1 0 Santaris Pharma 2009-11-06 [HT Sequencing] 454 GS FLX (Hepatitis C virus) (GPL9540) SRA Hepatitis C virus
Hepatitis C virus
unclassified source_name:HCV-from-4x0513_week27 title:5' NCR from HCV isolated at week 27 from 4x0513 rep1 description:4x0513-11-26-08
535 GSM468727 5' NCR from HCV isolated at week 23 from 4x0514 rep2 0 Santaris Pharma 2009-11-06 [HT Sequencing] 454 GS FLX (Hepatitis C virus) (GPL9540) SRA Hepatitis C virus
Hepatitis C virus
unclassified source_name:HCV-from-4x0514_week23 title:5' NCR from HCV isolated at week 23 from 4x0514 rep2 description:4x0514-9-17-08
536 GSM468719 5' NCR from HCV isolated at week 23 from 4x0514 rep1 0 Santaris Pharma 2009-11-06 [HT Sequencing] 454 GS FLX (Hepatitis C virus) (GPL9540) SRA Hepatitis C virus
Hepatitis C virus
unclassified source_name:HCV-from-4x0514_week23 title:5' NCR from HCV isolated at week 23 from 4x0514 rep1 description:4x0514-9-17-08
537 GSM468723 5' NCR from HCV isolated at week 17 from 4x0513 rep2 0 Santaris Pharma 2009-11-06 [HT Sequencing] 454 GS FLX (Hepatitis C virus) (GPL9540) SRA Hepatitis C virus
Hepatitis C virus
unclassified source_name:HCV-from-4x0513_week17 title:5' NCR from HCV isolated at week 17 from 4x0513 rep2 description:4x0513-10-29-08
538 GSM468715 5' NCR from HCV isolated at week 17 from 4x0513 rep1 0 Santaris Pharma 2009-11-06 [HT Sequencing] 454 GS FLX (Hepatitis C virus) (GPL9540) SRA Hepatitis C virus
Hepatitis C virus
unclassified source_name:HCV-from-4x0513_week17 title:5' NCR from HCV isolated at week 17 from 4x0513 rep1 description:4x0513-10-29-08
539 GSM468726 5' NCR from HCV isolated at week 11 from 4x0514 rep2 0 Santaris Pharma 2009-11-06 [HT Sequencing] 454 GS FLX (Hepatitis C virus) (GPL9540) SRA Hepatitis C virus
Hepatitis C virus
unclassified source_name:HCV-from-4x0514_week11 title:5' NCR from HCV isolated at week 11 from 4x0514 rep2 description:4x0514-8-6-08
540 GSM468718 5' NCR from HCV isolated at week 11 from 4x0514 rep1 0 Santaris Pharma 2009-11-06 [HT Sequencing] 454 GS FLX (Hepatitis C virus) (GPL9540) SRA Hepatitis C virus
Hepatitis C virus
unclassified source_name:HCV-from-4x0514_week11 title:5' NCR from HCV isolated at week 11 from 4x0514 rep1 description:4x0514-8-6-08
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