Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(224)		   SAGE RsaI
(1)		   SAGE Sau3A
(16)		   MPSS
(56)		   GeneChip
(16,580)		   Tiling Array
(3,529)		   cDNA Array
(5,792)		   Oligo Array
(11,628)		   Bead Array
(2,848)		   Protein Array
(1)		   Antibody
(37)		   RT-PCR
(223)		   HT-Seq
(4,411)		   Other
(158)		   All
(45,516)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
61 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae (GSE11611) [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) Virginia Tech 2008-05-29 Glycine max
Glycine max		 154,270,740
(61,170 x 2,522) 		6 2,516 by_platform
by_series
62 Distinct genomic differences in prostate cancer between Western countries and China (GSE18333) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Queen Mary 2009-09-29 Homo sapiens
Homo sapiens		 154,225,108
(1,880,794 x 82) 		82 by_platform
by_series
63 DNA Copy-Number Alterations in clear-cell Renal Cell Carcinoma (ccRCC) Tumors and Tumorgrafts for samples deficient in BAP1 or PBRM1 (GSE25540) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) UT Southwestern Medical Center 2010-11-22 Homo sapiens
Homo sapiens		 150,463,520
(1,880,794 x 80) 		21 4 3 26 26 by_platform
by_series
64 Structural Variation of Chromosomes in Autism Spectrum Disorder. (GSE9222) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) The Hospital for Sick Children 2007-10-03 Homo sapiens
Homo sapiens		 148,745,646
(262,338 x 567) 		567 by_platform
by_series
65 Genetic adaptability of cancer cells under treatment selection pressure in multiple myeloma patients. (GSE25262) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) ICO - UMGC 2010-11-10 Homo sapiens
Homo sapiens		 139,178,756
(1,880,794 x 74) 		2 72 by_platform
by_series
66 Minor clone provides a reservoir for relapse in multiple myeloma (GSE37469) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) ICO - UMGC 2012-04-20 Homo sapiens
Homo sapiens		 139,178,756
(1,880,794 x 74) 		2 72 by_platform
by_series
67 Exon Array expression data from 13 areas of the late second trimester human brain (GSE13344) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) Yale University School of Medicine 2008-10-24 Homo sapiens
Homo sapiens		 136,054,725
(1,432,155 x 95) 		95 by_platform
by_series
68 University of Washington Human Reference Epigenome Mapping Project (GSE18927) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) University of Washington 2009-11-06 Homo sapiens
Homo sapiens		 136,054,725
(1,432,155 x 95) 		5 15 3 12 4 22 15 2 9 8 by_platform
by_series
69 Intrinsic glioma subtypes in EORTC 26951 (part 1) (GSE43107) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) Erasmus MC 2012-12-21 Homo sapiens
Homo sapiens		 136,054,725
(1,432,155 x 95) 		95 by_platform
by_series
70 Intrinsic glioma subtypes in EORTC 26951 (GSE43388) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) Erasmus MC 2013-01-09 Homo sapiens
Homo sapiens		 136,054,725
(1,432,155 x 95) 		95 by_platform
by_series
71 Identification of Novel Oncogene Loci in Ovarian Cancer through Integrated Copy Number and Expression Analysis (GSE19539) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Peter MacCallum Cancer Centre 2009-12-17 Homo sapiens
Homo sapiens		 135,417,168
(1,880,794 x 72) 		72 by_platform
by_series
72 Structural Variation of Chromosomes in Autism Spectrum Disorder. (GSE9222) [GeneChip] [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array (GPL3720) The Hospital for Sick Children 2007-10-03 Homo sapiens
Homo sapiens		 135,160,326
(238,378 x 567) 		567 by_platform
by_series
73 Mouse Exon Atlas (GSE15998) [GeneChip] [MoEx-1_0-st] Affymetrix Mouse Exon 1.0 ST Array [probe set (exon) version] (GPL6193) Genomics Institute of the Novartis Research Foundation 2009-05-06 Mus musculus
Mus musculus		 133,224,086
(1,256,831 x 106) 		18 14 10 10 3 6 2 2 3 10 4 8 16 by_platform
by_series
74 Improved detection of global copy number variation using high density, non-polymorphic oligonucleotide probes (GSE9053) [GeneChip] Nsp copy number (CN) array (ds2) (GPL6660) Affymetrix, Inc 2007-09-14 Homo sapiens
Homo sapiens		 131,805,408
(6,276,448 x 21) 		21 by_platform
by_series
75 Affymetrix SNP 6.0 array data for human embryonic stem cell lines (GSE15096) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) University of Turku 2009-03-04 Homo sapiens
Homo sapiens		 129,774,786
(1,880,794 x 69) 		2 27 40 by_platform
by_series
76 High resolution genome wide DNA analysis on a large panel of Human Embryonic stem cell lines (GSE15097) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) University of Turku 2009-03-04 Homo sapiens
Homo sapiens		 129,774,786
(1,880,794 x 69) 		2 27 40 by_platform
by_series
77 Cancer Outlier Gene Profile Sets Elucidate Pathways and Patient-Specific Targets in Head and Neck Squamous Cell Carcinoma [Affymetrix SNP6] (GSE33229) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Johns Hopkins University 2011-10-25 Homo sapiens
Homo sapiens		 129,774,786
(1,880,794 x 69) 		69 by_platform
by_series
78 Cancer Outlier Gene Profile Sets Elucidate Pathways and Patient-Specific Targets in Head and Neck Squamous Cell Carcinoma (GSE33232) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Johns Hopkins University 2011-10-25 Homo sapiens
Homo sapiens		 129,774,786
(1,880,794 x 69) 		69 by_platform
by_series
79 Improved detection of global copy number variation using high density, non-polymorphic oligonucleotide probes (GSE9053) [GeneChip] Nsp copy number (CN) array (ds1) (GPL6659) Affymetrix, Inc 2007-09-14 Homo sapiens
Homo sapiens		 128,542,806
(6,121,086 x 21) 		21 by_platform
by_series
80 High-resolution mapping of copy-number alterations with massively parallel sequencing (GSE13372) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) University of North Carolina 2008-10-27 Homo sapiens
Homo sapiens		 127,893,992
(1,880,794 x 68) 		33 1 34 by_platform
by_series
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