Gene Expression Omnibus (GEO) Overview

DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

All
(898,944)

SAGE NlaIII
(1,683)

SAGE RsaI
(3)

SAGE Sau3A
(54)

MPSS
(439)

GeneChip
(377,145)

Tiling Array
(21,846)

cDNA Array
(103,476)

Oligo Array
(239,584)

adult aerial structure
(49)

young aerial structure
(85)

root
(32)

meristem/growing tissue
(26)

flower/sexual organ
(9)

seed/fruit/grain
(3)

pooled
(20)

unclassified
(97)

all
(439)

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	Sample ID	Title	Number of Data	Institute	Submission date	Platform	Sample type	Species	Organ class	Reasoning of the classification Keywords used for the classification are shown with bold font.
21	GSM1005124	Wild type mechanical damage vs herbivore wounding Replicate 4	39,102	University of Turin	2012-09-17	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	leaf	WT rosette leaves mechanical damaged WT rosette leaves herbivore wounded
22	GSM1005123	Wild type mechanical damage vs herbivore wounding Replicate 3	39,102	University of Turin	2012-09-17	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	leaf	WT rosette leaves mechanical damaged WT rosette leaves herbivore wounded
23	GSM1005122	Wild type mechanical damage vs herbivore wounding Replicate 2	39,102	University of Turin	2012-09-17	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	leaf	WT rosette leaves mechanical damaged WT rosette leaves herbivore wounded
24	GSM1005121	Wild type mechanical damage vs herbivore wounding Replicate 1	39,102	University of Turin	2012-09-17	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	leaf	WT rosette leaves mechanical damaged WT rosette leaves herbivore wounded
25	GSM1005120	Wild type Magnesium chloride infiltrated vs Pseudomonas syringae infected. Replicate 4	39,102	University of Turin	2012-09-17	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	leaf	WT rosette leaves Magnesium chloride infiltrated WT rosette leaves Pseudomonas syringae infected
26	GSM1005119	Wild type Magnesium chloride infiltrated vs Pseudomonas syringae infected. Replicate 3	39,102	University of Turin	2012-09-17	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	leaf	WT rosette leaves Magnesium chloride infiltrated WT rosette leaves Pseudomonas syringae infected
27	GSM1005118	Wild type Magnesium chloride infiltrated vs Pseudomonas syringae infected. Replicate 2	39,102	University of Turin	2012-09-17	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	leaf	WT rosette leaves Magnesium chloride infiltrated WT rosette leaves Pseudomonas syringae infected
28	GSM1005117	Wild type Magnesium chloride infiltrated vs Pseudomonas syringae infected. Replicate 1	39,102	University of Turin	2012-09-17	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	leaf	WT rosette leaves Magnesium chloride infiltrated WT rosette leaves Pseudomonas syringae infected
29	GSM32359	White fat, Male (MoWF.MaAb)	10,895	Solexa	2004-10-14	[MPSS] MPSS [DpnII: Mus musculus] signature list (GPL1010)	MPSS	Mus musculus	adipos	White fat, Male total RNA
30	GSM27144	White fat, Female (MoWF.FeAb)	10,367	Solexa	2004-07-20	[MPSS] MPSS [DpnII: Mus musculus] signature list (GPL1010)	MPSS	Mus musculus	adipos	White fat, Female total RNA
31	GSM609381	voz1_voz2_14d_seedlings_rep4	37,478	National Institute of Advanced Industrial Science and Technology	2010-10-16	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299)	RNA	Arabidopsis thaliana	young aerial structure	voz1 voz2 14d seedlings
32	GSM609380	voz1_voz2_14d_seedlings_rep3	37,478	National Institute of Advanced Industrial Science and Technology	2010-10-16	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299)	RNA	Arabidopsis thaliana	young aerial structure	voz1 voz2 14d seedlings
33	GSM609379	voz1_voz2_14d_seedlings_rep2	37,478	National Institute of Advanced Industrial Science and Technology	2010-10-16	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299)	RNA	Arabidopsis thaliana	young aerial structure	voz1 voz2 14d seedlings
34	GSM609378	voz1_voz2_14d_seedlings_rep1	37,478	National Institute of Advanced Industrial Science and Technology	2010-10-16	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299)	RNA	Arabidopsis thaliana	young aerial structure	voz1 voz2 14d seedlings
35	GSM35329	Uterus:Pregnant E18, Female (MoUt.FP18)	10,805	Solexa	2004-11-15	[MPSS] MPSS [DpnII: Mus musculus] signature list (GPL1010)	MPSS	Mus musculus	uterus	Uterus:Pregnant E18, Female total RNA
36	GSM35330	Uterus, Female (MoUt.Feml)	7,472	Solexa	2004-11-15	[MPSS] MPSS [DpnII: Mus musculus] signature list (GPL1010)	MPSS	Mus musculus	uterus	Uterus, Female total RNA
37	GSM265799	UNT library	52,928	University of Delaware	2008-02-13	[MPSS] Rice small RNA MPSS signatures (GPL3776)	MPSS	Oryza sativa	young aerial structure	Seedling control for ABA treatment
38	GSM736647	transgenic line A vs. Wild type, 8 weeks, rep 3	37,685	University of Pretoria	2011-06-02	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	unclassified	source_name:transgenic line A, 8 weeks wild type, 8 weeks title:transgenic line A vs. Wild type, 8 weeks, rep 3 description:Biological rep 3
39	GSM736646	transgenic line A vs. Wild type, 8 weeks, rep 2	37,685	University of Pretoria	2011-06-02	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	unclassified	source_name:transgenic line A, 8 weeks wild type, 8 weeks title:transgenic line A vs. Wild type, 8 weeks, rep 2 description:Biological rep 2
40	GSM736645	transgenic line A vs. Wild type, 8 weeks, rep 1 tech rep 2	37,685	University of Pretoria	2011-06-02	[MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177)	RNA	Arabidopsis thaliana	unclassified	source_name:transgenic line A, 8 weeks wild type, 8 weeks title:transgenic line A vs. Wild type, 8 weeks, rep 1 tech rep 2 description:Biological rep 1

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