Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(1,697)
  SAGE RsaI
(3)
  SAGE Sau3A
(54)
  MPSS
(507)
  GeneChip
(441,758)
  Tiling Array
(24,730)
  cDNA Array
(109,124)
  Oligo Array
(288,250)
  Bead Array
(148,432)
  Protein Array
(5)
  Antibody
(1,287)
  RT-PCR
(6,509)
  HT-Seq
(64,850)
  Other
(13,899)
  All
(1,101,311)
 
  brain
(37)
  blood
(13)
  connective
(10)
  reproductive
(12)
  muscular
(7)
  digestive
(10)
  liver
(6)
  lung
(4)
  urinary
(5)
  endo/exo-crine
(13)
  embryo
(3)
  adult aerial structure
(49)
  young aerial structure
(121)
  root
(36)
  meristem/growing tissue
(36)
  flower/sexual organ
(15)
  seed/fruit/grain
(3)
  pooled
(26)
  unclassified
(101)
  all
(507)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
21 GSM790592 wild_type_Arabidopsis_3wk_seedling-rep4 37,478 National Institute of Advanced Industrial Science and Technology 2011-09-06 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Wild-type_3wk_seedlings
22 GSM790591 wild_type_Arabidopsis_3wk_seedling-rep3 37,478 National Institute of Advanced Industrial Science and Technology 2011-09-06 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Wild-type_3wk_seedlings
23 GSM790590 wild_type_Arabidopsis_3wk_seedling-rep2 37,478 National Institute of Advanced Industrial Science and Technology 2011-09-06 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Wild-type_3wk_seedlings
24 GSM790589 wild_type_Arabidopsis_3wk_seedling-rep1 37,478 National Institute of Advanced Industrial Science and Technology 2011-09-06 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Wild-type_3wk_seedlings
25 GSM1248924 Wild_type_Arabidopsis_2wks_seedling_rep4 37,478 National Institute of Advanced Industrial Science and Technology 2013-10-23 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Wild-type Arabidopsis thaliana 2wks seedlings
26 GSM1248923 Wild_type_Arabidopsis_2wks_seedling_rep3 37,478 National Institute of Advanced Industrial Science and Technology 2013-10-23 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Wild-type Arabidopsis thaliana 2wks seedlings
27 GSM1248922 Wild_type_Arabidopsis_2wks_seedling_rep2 37,478 National Institute of Advanced Industrial Science and Technology 2013-10-23 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Wild-type Arabidopsis thaliana 2wks seedlings
28 GSM1248921 Wild_type_Arabidopsis_2wks_seedling_rep1 37,478 National Institute of Advanced Industrial Science and Technology 2013-10-23 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Probe Name version) (GPL7299) RNA Arabidopsis thaliana
Arabidopsis thaliana
young aerial structure Wild-type Arabidopsis thaliana 2wks seedlings
29 GSM1212493 wild-type ovules 0 CINVESTAV 2013-08-20 [MPSS] Arabidopsis thaliana MPSS (GPL17594) RNA Arabidopsis thaliana
Arabidopsis thaliana
ovary ovules
30 GSM1005128 Wild type mechanical damaged vs Myzus persicae feeding. Replicate 4 39,102 University of Turin 2012-09-17 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf WT rosette leaves mechanical damaged WT rosette leaves aphid wounded
31 GSM1005127 Wild type mechanical damaged vs Myzus persicae feeding. Replicate 3 39,102 University of Turin 2012-09-17 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf WT rosette leaves mechanical damaged WT rosette leaves aphid wounded
32 GSM1005126 Wild type mechanical damaged vs Myzus persicae feeding. Replicate 2 39,102 University of Turin 2012-09-17 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf WT rosette leaves mechanical damaged WT rosette leaves aphid wounded
33 GSM1005125 Wild type mechanical damaged vs Myzus persicae feeding. Replicate 1 39,102 University of Turin 2012-09-17 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf WT rosette leaves mechanical damaged WT rosette leaves aphid wounded
34 GSM1005124 Wild type mechanical damage vs herbivore wounding Replicate 4 39,102 University of Turin 2012-09-17 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf WT rosette leaves mechanical damaged WT rosette leaves herbivore wounded
35 GSM1005123 Wild type mechanical damage vs herbivore wounding Replicate 3 39,102 University of Turin 2012-09-17 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf WT rosette leaves mechanical damaged WT rosette leaves herbivore wounded
36 GSM1005122 Wild type mechanical damage vs herbivore wounding Replicate 2 39,102 University of Turin 2012-09-17 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf WT rosette leaves mechanical damaged WT rosette leaves herbivore wounded
37 GSM1005121 Wild type mechanical damage vs herbivore wounding Replicate 1 39,102 University of Turin 2012-09-17 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf WT rosette leaves mechanical damaged WT rosette leaves herbivore wounded
38 GSM1005120 Wild type Magnesium chloride infiltrated vs Pseudomonas syringae infected. Replicate 4 39,102 University of Turin 2012-09-17 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf WT rosette leaves Magnesium chloride infiltrated WT rosette leaves Pseudomonas syringae infected
39 GSM1005119 Wild type Magnesium chloride infiltrated vs Pseudomonas syringae infected. Replicate 3 39,102 University of Turin 2012-09-17 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf WT rosette leaves Magnesium chloride infiltrated WT rosette leaves Pseudomonas syringae infected
40 GSM1005118 Wild type Magnesium chloride infiltrated vs Pseudomonas syringae infected. Replicate 2 39,102 University of Turin 2012-09-17 [MPSS] Agilent-015059 Arabidopsis 3 Oligo Microarray 4x44K G2519F (Feature Number version) (GPL6177) RNA Arabidopsis thaliana
Arabidopsis thaliana
leaf WT rosette leaves Magnesium chloride infiltrated WT rosette leaves Pseudomonas syringae infected
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