Gene Expression Omnibus (GEO) Overview Version:2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(205)
  Primates
(0)
  Rodents
(86)
  Mammals
(8)
  Vertebrates
(9)
  Invertebrates
(17)
  Plants
(67)
  Bacteria
(37)
  Viruses
(0)
  Phages
(0)
  Unclassified
(4)
  All
(433)
 
  SAGE NlaIII
(2)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(2)
  GeneChip
(106)
  Tiling Array
(12)
  cDNA Array
(36)
  Oligo Array
(161)
  Bead Array
(80)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(34)
  Other
(0)
  All
(433)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
61 Genome-wide expression profiling reveals transcriptional reprogramming in Fusarium graminearum by FgV1-DK21 virus infection (GSE30545) [Oligo Array] Roche Nimblegen G.zeae 135K microarray (GPL13843) Seoul National University 2011-07-11 Gibberella zeae
Gibberella zeae
160,656
(13,388 x 12)
12 by_platform
by_series
62 Flucytosine-responsive APSES proteins, Msa1 and Mbs1, play pleiotropic roles in stress response, differentiation, and virulence of Cryptococcus neoformans (GSE30158) [Oligo Array] Duke Cryptococcus neoformans serotype D (JEC21) 8K (GPL8638) Yonsei University 2011-06-22 Cryptococcus neoformans var. grubii H99
Cryptococcus neoformans var. grubii H99
253,440
(8,448 x 30)
30 by_platform
by_series
63 Toc1, Toc2, and Skn7 null mutants treated with Flucytosine (GSE30154) [Oligo Array] Duke Cryptococcus neoformans serotype D (JEC21) 8K (GPL8638) Yonsei University 2011-06-22 Cryptococcus neoformans var. grubii H99
Cryptococcus neoformans var. grubii H99
202,752
(8,448 x 24)
24 by_platform
by_series
64 A flucytosine-responsive APSES protein, Mbs1, plays pleiotropic roles in stress response, differentiation, and virulence of Cryptococcus neoformans (GSE30156) [Oligo Array] Duke Cryptococcus neoformans serotype D (JEC21) 8K (GPL8638) Yonsei University 2011-06-22 Cryptococcus neoformans var. grubii H99
Cryptococcus neoformans var. grubii H99
76,032
(8,448 x 9)
9 by_platform
by_series
65 Coordinated regulation of MAPK signaling pathway and microRNA in response to ionizing radiation in lung cancer cells (GSE30075) [Oligo Array] Ambion mirVana miRNA bioarray 1566V2_Jun12 (GPL13744) Seoul National University 2011-06-17 Homo sapiens
Homo sapiens
31,848
(2,654 x 12)
2 2 8 by_platform
by_series
66 Genome-scale DNA methylation pattern profiling of human bone marrow mesenchymal stem cells in long-term culture (GSE30018) [Oligo Array] NimbleGen Human HG18 promoter 2.1M array (GPL13732) GenoCheck 2011-06-16 Homo sapiens
Homo sapiens
2
(0 x 2)
2 by_platform
by_series
67 Gene expression changes upon the mutation of individual residues of histone H3 and H4 (GSE29059) [Oligo Array] NimbleGen S. cerevisiae Gene Expression (12x135K) (gene-level) (GPL13492) KAIST 2011-05-04 Saccharomyces cerevisiae
Saccharomyces cerevisiae
746,760
(5,880 x 127)
127 by_platform
by_series
68 Structural mapping of regulatory function of histone H3 and H4 residues (GSE29064) [Oligo Array] NimbleGen S. cerevisiae Gene Expression (12x135K) (gene-level) (GPL13492) KAIST 2011-05-04 Saccharomyces cerevisiae
Saccharomyces cerevisiae
746,760
(5,880 x 127)
127 by_platform
by_series
69 Escherichia coli O157:H7 : Control vs. PEG8000 treated (GSE28312) [Oligo Array] Ocimum Biosolutions E.coli O157 OciChip (alternative version) (GPL13358) Korea University 2011-04-01 Escherichia coli
Escherichia coli
6,232
(6,232 x 1)
1 by_platform
by_series
70 Discovery of Gene Expression Signature in the Overexpression of miR-145 in U87 glioma cell. (GSE28121) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version) (GPL6480) national cacner center 2011-03-23 Homo sapiens
Homo sapiens
41,094
(41,094 x 1)
1 by_platform
by_series
71 in vivo and in vitro study of asthma (GSE27876) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version) (GPL6480) Chung-Ang University 2011-03-10 Homo sapiens
Homo sapiens
780,786
(41,094 x 19)
19 by_platform
by_series
72 Methylation profile in breast cancer (GSE27374) [Oligo Array] Agilent-014791 Human CpG Island ChIP-on-Chip Microarray 244K (G4492A) (Probe Name version) (GPL9767) Genomictree 2011-02-17 Homo sapiens
Homo sapiens
481,938
(240,969 x 2)
2 by_platform
by_series
73 Comparable mRNA expression of pluripotency-related genes in SNUhES3 cells cultured on autofeeder or xenofeeder system (GSE26993) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version) (GPL4133) seoul natonal university 2011-02-01 Homo sapiens
Homo sapiens
180,880
(45,220 x 4)
4 by_platform
by_series
74 Agilent_E. coli O157 response to Chrysanthemum herba (GSE26017) [Oligo Array] Biodesign Inst. at ASU Escherichia coli Agilent-020097 array (GPL8984) Kyunghee Univ. 2010-12-11 Escherichia coli
Escherichia coli
15,744
(15,744 x 1)
1 by_platform
by_series
75 Genomic aberrations in primary central nervous system lymphoma (PCNSL) (GSE25298) [Oligo Array] Agilent-014950 Human Genome CGH Microarray 4x44K (Probe Name version) (GPL8841) Samsung Medical Center 2010-11-12 Homo sapiens
Homo sapiens
1,082,675
(43,307 x 25)
13 12 by_platform
by_series
76 Genomic profiling combined with gene expression profiling in primary central nervous system lymphoma (GSE25299) [Oligo Array] Agilent-014950 Human Genome CGH Microarray 4x44K (Probe Name version) (GPL8841) Samsung Medical Center 2010-11-12 Homo sapiens
Homo sapiens
1,082,675
(43,307 x 25)
13 12 by_platform
by_series
77 Genome-wide gene expression comparison (primary central nervous system lymphoma (PCNSL) vs normal lymph node) (GSE25297) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version) (GPL6480) Samsung Medical Center 2010-11-12 Homo sapiens
Homo sapiens
575,316
(41,094 x 14)
7 7 by_platform
by_series
78 Genomic profiling combined with gene expression profiling in primary central nervous system lymphoma (GSE25299) [Oligo Array] Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Probe Name version) (GPL6480) Samsung Medical Center 2010-11-12 Homo sapiens
Homo sapiens
575,316
(41,094 x 14)
7 7 by_platform
by_series
79 Differential gene expression profiles of human promyelocytic leukemia cell line exposed to benzene toluene, and o-xylene (GSE24899) [Oligo Array] Operon Homo sapiens 34K (GPL7080) Korea Institute of Science and Technology 2010-10-23 Homo sapiens
Homo sapiens
278,964
(30,996 x 9)
9 by_platform
by_series
80 Gene expression changes in patient-matched gastric normal mucosa, adenomas, and carcinomas (GSE24375) [Oligo Array] Catholic Human 19K (GPL10982) The Catholic Univ. of Korea 2010-09-27 Homo sapiens
Homo sapiens
499,200
(19,200 x 26)
18 8 by_platform
by_series
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