Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(279)
  Primates
(0)
  Rodents
(126)
  Mammals
(16)
  Vertebrates
(9)
  Invertebrates
(19)
  Plants
(87)
  Bacteria
(50)
  Viruses
(0)
  Phages
(0)
  Unclassified
(6)
  All
(592)
 
  SAGE NlaIII
(2)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(2)
  GeneChip
(132)
  Tiling Array
(12)
  cDNA Array
(37)
  Oligo Array
(220)
  Bead Array
(113)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(74)
  Other
(0)
  All
(592)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
61 Variant acute promyelocytic leukemia (APL) bone marrow aCGH (GSE42984) [Oligo Array] Agilent-022060 SurePrint G3 Human CGH Microarray 4x180K (Feature Number version) (GPL10123) Asan Medical Center 2012-12-18 Homo sapiens
Homo sapiens
180,880
(180,880 x 1)
1 by_platform
by_series
62 Patient specific orthotopic glioblastoma xenograft models recapitulate the histopathology and biology of human glioblastomas in situ (GSE42670) [Oligo Array] Agilent-014693 Human Genome CGH Microarray 244A (Feature number version) (GPL4091) Samsung Medical Center 2012-12-02 Homo sapiens
Homo sapiens
487,008
(243,504 x 2)
1 1 by_platform
by_series
63 Patient specific orthotopic glioblastoma xenograft models recapitulate the histopathology and biology of human glioblastomas in situ (CGH) (GSE42577) [Oligo Array] Agilent-014693 Human Genome CGH Microarray 244A (Feature number version) (GPL4091) Samsung Medical Center 2012-11-28 Homo sapiens
Homo sapiens
487,008
(243,504 x 2)
1 1 by_platform
by_series
64 Alkaline Phosphatase ALPPL2 is a novel pancreatic carcinoma-associated protein (GSE42429) [Oligo Array] NimbleGen Homo sapiens HG18 090828 opt expr HX12 (12x135k) (GPL10191) Sungkyunkwan University 2012-11-20 Homo sapiens
Homo sapiens
405,297
(45,033 x 9)
9 by_platform
by_series
65 Expression analysis of human pancreatic cancer cell lines (Capan-1, Panc-1, Panc-1+ve and Panc-1-ve) and pancreatic ductal cell line (HPDE) (GSE42428) [Oligo Array] NimbleGen Homo sapiens HG18 090828 opt expr HX12 (12x135k) (GPL10191) Sungkyunkwan University 2012-11-20 Homo sapiens
Homo sapiens
225,165
(45,033 x 5)
5 by_platform
by_series
66 Expression analysis of RNAi mediated ALPPL2 knockdown in ALPPL2 expressing Panc-1 cells (Panc-1+ve) (GSE42427) [Oligo Array] NimbleGen Homo sapiens HG18 090828 opt expr HX12 (12x135k) (GPL10191) Sungkyunkwan University 2012-11-20 Homo sapiens
Homo sapiens
180,132
(45,033 x 4)
4 by_platform
by_series
67 Arabidopsis thaliana vegetative part: Col-0 vs. shr scl23 scr triple mutant (GSE41478) [Oligo Array] Agilent-021169 Arabidopsis 4 Oligo Microarray (V4) (Probe Name version) (GPL12621) KonKuk University 2012-10-10 Arabidopsis thaliana
Arabidopsis thaliana
174,652
(43,663 x 4)
4 by_platform
by_series
68 human placenta-derived cell line (JEG-3): Control vs. valproic acid(VPA)-treated (GSE41441) [Oligo Array] Agilent-012391 Whole Human Genome Oligo Microarray G4112A (Feature Number version) (GPL1708) Eulji University 2012-10-10 Homo sapiens
Homo sapiens
132,870
(44,290 x 3)
3 by_platform
by_series
69 Pseudomonas putida KT2440: Control vs. indole 1mM treated (GSE41254) [Oligo Array] Pseudomonas putida KT2440 Mycroarrays (GPL10799) Korea university 2012-10-01 Pseudomonas putida KT2440
Pseudomonas putida KT2440
10,618
(5,309 x 2)
2 by_platform
by_series
70 Expression analysis of CaMsrB2-transformed rice (Oryza sativa L. cv. ILMI) without/with Bar selection marker under drought stress conditions (GSE41204) [Oligo Array] Rice_135k_tiling_V2 array (GPL14568) GreenGene Biotech Inc. 2012-09-27 Oryza sativa
Oryza sativa
473,820
(31,588 x 15)
15 by_platform
by_series
71 Gene alteration in A549 cells by disinfectant PHMG (GSE41156) [Oligo Array] Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Feature Number version) (GPL10332) College of Medicine, Soonchunhyang University 2012-09-26 Homo sapiens
Homo sapiens
45,220
(45,220 x 1)
1 by_platform
by_series
72 Synbiotic impact of tagatose on viability of Lactobacillus rhamnosus strain GG mediated by the phosphotransferase system (PTS) (GSE41073) [Oligo Array] Lactobacillus rhanmosus ATCC 53103 4x44K Microarrays (GPL16093) Chonbuk National University 2012-09-21 Lactobacillus rhamnosus GG
Lactobacillus rhamnosus GG
12,186
(12,186 x 1)
1 by_platform
by_series
73 ARF6 bi-directionally regulates the dendritic spine formation depending on neuronal maturation and activity. (GSE40937) [Oligo Array] Agilent-028282 Whole Rat Genome Microarray 4x44K v3 (Feature Number version) (GPL14745) Pohang Univ. of Science & Technology 2012-09-17 Rattus norvegicus
Rattus norvegicus
180,880
(45,220 x 4)
4 by_platform
by_series
74 Pleiotropic roles of Msi1-like protein, Msl1, in growth, differentiation, stress response, and virulence of Cryptococcus neoformans (GSE40303) [Oligo Array] Duke Cryptococcus neoformans serotype D (JEC21) 8K (GPL8638) Yonsei University 2012-08-22 Cryptococcus neoformans var. grubii H99,Cryptococcus neoformans var. grubii
Cryptococcus neoformans var. grubii H99,Cryptococcus neoformans var. grubii
50,688
(8,448 x 6)
6 by_platform
by_series
75 Transcriptomic analysis of differential genetic expression under CosR-knockdown condition compared with wild-type (GSE40201) [Oligo Array] Campylobacter jejuni subsp. jejuni NCTC 11168 15K Microarrays (GPL15955) Seoul National University 2012-08-17 Campylobacter jejuni
Campylobacter jejuni
13,176
(4,392 x 3)
3 by_platform
by_series
76 Identification of a radiosensitive gene signature in gastric cancer cells using microarray analysis (GSE39747) [Oligo Array] Genomic Tree-Yonsei Cancer Center Human 23K Array (GPL15868) Yonsei Cancer Center 2012-07-30 Homo sapiens
Homo sapiens
272,880
(22,740 x 12)
12 by_platform
by_series
77 Oncogenic Potential of SIRT7 in Human Hepatocellular Carcinoma and its Regulation by the Tumor Suppressors MiR-125a-5p and MiR-125b (GSE39678) [Oligo Array] Homo sapiens 0.5K microRNA Ca_Hu_MiRNome_v1 (GPL15852) The Catholic Univ. of Korea 2012-07-26 Homo sapiens
Homo sapiens
11,808
(492 x 24)
24 by_platform
by_series
78 Methylation profiling in gastric cancer (GSE39532) [Oligo Array] Agilent-014791 Human CpG Island ChIP-on-Chip Microarray 244K (G4492A) (Feature Number version) (GPL4126) Genomictree 2012-07-20 Homo sapiens
Homo sapiens
487,008
(243,504 x 2)
2 by_platform
by_series
79 Gene expression profiling in senescence leaves from senescence-inducible LEC2 in Arabidopsis (GSE38489) [Oligo Array] Roche NimbleGen | A. thaliana Gene Expression 385K Arrays (GPL15215) GreenGene Biotech Inc. 2012-06-05 Arabidopsis thaliana
Arabidopsis thaliana
273,474
(30,386 x 9)
9 by_platform
by_series
80 Early-stage breast cancer (GSE37839) [Oligo Array] Phalanx Human OneArray (GPL6254) Catholic University of Korea 2012-05-08 Homo sapiens
Homo sapiens
1,486,464
(30,968 x 48)
48 by_platform
by_series
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