Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(3,985)
  Primates
(80)
  Rodents
(1,907)
  Mammals
(359)
  Vertebrates
(450)
  Invertebrates
(1,139)
  Plants
(2,490)
  Bacteria
(1,901)
  Viruses
(90)
  Phages
(11)
  Unclassified
(542)
  All
(13,032)
 
  SAGE NlaIII
(83)
  SAGE RsaI
(1)
  SAGE Sau3A
(5)
  MPSS
(18)
  GeneChip
(809)
  Tiling Array
(1,310)
  cDNA Array
(2,770)
  Oligo Array
(5,679)
  Bead Array
(210)
  Protein Array
(1)
  Antibody
(28)
  RT-PCR
(209)
  HT-Seq
(1,710)
  Other
(187)
  All
(13,032)
 
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Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
21 GPL10349 TaqMan® Array Human MicroRNA Panel v1.0 384 Erasmus University Medical Center 2010-04-21 Applied Biosystems Homo sapiens
Homo sapiens
RT-PCR RT-PCR, TaqMan® Array Human MicroRNA Panel v1.0,
22 GPL17853 TaqMan® Array Human MicroRNA Cards Set v2.0 A/B 754 Nippon Medical School 2013-10-29 Applied Biosystems Homo sapiens
Homo sapiens
RT-PCR RT-PCR, TaqMan® Array Human MicroRNA Cards Set v2.0 A/B, PCR assay
23 GPL17915 TaqMan® Array Human MicroRNA A Cards v2.0 (catalog# 4398965) 384 Consejo Superior de Investigaciones Científicas & Universidad de Salamanca 2013-11-12 Life Technologies - Applied Biosystems Homo sapiens
Homo sapiens
RT-PCR RT-PCR, TaqMan® Array Human MicroRNA A Cards v2.0 (catalog# 4398965), The TaqMan® Array Human MicroRNA A Card v2.0 contains 384 TaqMan® MicroRNA Assays enabling accurate quantitation of 377 human microRNAs in as little as 5 hours. Three TaqMan MicroRNA Assay endogenous controls are included to aid in data normalization and one TaqMan® MicroRNA Assay not related to human is included as a negative control. Details on the included assays is available in the Target List file. Purchase of the Megaplex™ RT Primers, Human Pool A v2.1 is required to run this array. An additional preamplification step is enabled by Megaplex™ PreAmp Primers, Human Pool A v2.1 for situations where sensitivity is of the utmost importance and⁄or sample is limiting.
24 GPL13329 TaqMan(r) Array Human MicroRNA B Cards v2.0 384 Fondazione Istituto FIRC di Oncologia Molecolare 2011-03-25 Applied Biosystems Homo sapiens
Homo sapiens
RT-PCR RT-PCR, TaqMan(r) Array Human MicroRNA B Cards v2.0,
25 GPL13328 TaqMan(r) Array Human MicroRNA A Cards v2.0 384 Fondazione Istituto FIRC di Oncologia Molecolare 2011-03-25 Applied Biosystems Homo sapiens
Homo sapiens
RT-PCR RT-PCR, TaqMan(r) Array Human MicroRNA A Cards v2.0,
26 GPL16178 TaqMan Rodent microRNA A Card v3.0 381 Kennedy Institute of Rheumatology 2012-10-15 Applied Biosystems Mus musculus,Rattus norvegicus
Mus musculus,Rattus norvegicus
RT-PCR RT-PCR, TaqMan Rodent microRNA A Card v3.0,
27 GPL14646 TaqMan Rodent MicroRNA A Array v2.0 384 Stanford University 2011-10-02 Applied Biosystems Mus musculus,Rattus norvegicus
Mus musculus,Rattus norvegicus
RT-PCR RT-PCR, TaqMan Rodent MicroRNA A Array v2.0, TaqMan array rodent microRNA A Card v2.0 Real-time PCR based microRNA microarrays
28 GPL17017 TaqMan Rodent microRNA A array v2.0 379 Tufts Medical Center 2013-04-12 Applied Biosystems Mus musculus
Mus musculus
RT-PCR RT-PCR, TaqMan Rodent microRNA A array v2.0, PCR assay
29 GPL14924 TaqMan qRT-PCR Homo sapiens Low-Density Array 380 v 2 358 University of Namur 2011-11-23 Applied Biosystems Homo sapiens
Homo sapiens
RT-PCR RT-PCR, TaqMan qRT-PCR Homo sapiens Low-Density Array 380 v 2, TaqMan-based qRT-PCR assay similar to GPL13728
30 GPL13728 TaqMan qRT-PCR Homo sapiens Low-Density Array 380 380 University of Namur 2011-06-15 Applied Biosystems Homo sapiens
Homo sapiens
RT-PCR RT-PCR, TaqMan qRT-PCR Homo sapiens Low-Density Array 380, TaqMan-based qRT-PCR assay.
31 GPL14938 TaqMan qRT-PCR Homo sapiens Low-Density Array 96 Univ of California San Diego 2011-11-29 Applied Biosystem Homo sapiens
Homo sapiens
RT-PCR RT-PCR, TaqMan qRT-PCR Homo sapiens Low-Density Array, TaqMan® Gene Signature Array Configuration - Human Angiogenesis Array
32 GPL13680 Taqman qRT-PCR Homo sapiens 384 384 University of Namur 2011-06-02 Applied Biosystems Homo sapiens
Homo sapiens
RT-PCR RT-PCR, Taqman qRT-PCR Homo sapiens 384, TaqMan-based qRT-PCR assay
33 GPL16971 TaqMan OpenArray Rodent MicroRNA Panel 747 University of Michigan 2013-04-05 TaqMan OpenArray Mus musculus
Mus musculus
RT-PCR RT-PCR, TaqMan OpenArray Rodent MicroRNA Panel, TaqMan OpenArray Rodent MicroRNA Plate Serial Number GOF03
34 GPL17837 TaqMan OpenArray Human MicroRNA Panel (4461104) 762 Johns Hopkins University School of Medicine 2013-10-24 Applied Biosystems by Life Technologies Homo sapiens
Homo sapiens
RT-PCR RT-PCR, TaqMan OpenArray Human MicroRNA Panel (4461104),
35 GPL18068 TaqMan microRNA Low-Density Array pools A an B 877 Vanderbilt Univ. School of Medicine 2013-12-13 Life Technologies Homo sapiens
Homo sapiens
RT-PCR RT-PCR, TaqMan microRNA Low-Density Array pools A an B,
36 GPL9019 TaqMan MicroRNA Assays Human Panel Early Access Kit (Applied Biosystems) 157 University of Modena and Reggio Emilia 2009-08-11 Homo sapiens
Homo sapiens
RT-PCR RT-PCR, TaqMan MicroRNA Assays Human Panel Early Access Kit (Applied Biosystems), The original platform is composed of two 96-well plates (Plate A and Plate B) whose content is here merged into one single platform. Applied Biosystems Catalog Number: 4365409. Currently no more available for sale.
37 GPL17344 TaqMan Low-Density Array (TLDA) microfluidic cards 0 University of Barcelona 2013-06-26 Applied Biosystems, USA Homo sapiens
Homo sapiens
RT-PCR RT-PCR, TaqMan Low-Density Array (TLDA) microfluidic cards, ABI Prism 7900HT sequence detection system
38 GPL10522 TaqMan Human MicroRNA Array v1.0 (Early Access) 384 University Health Network 2010-06-09 Applied Biosystems Homo sapiens
Homo sapiens
RT-PCR RT-PCR, TaqMan Human MicroRNA Array v1.0 (Early Access),
39 GPL4097 TaqMan Human MAQC (TAQ) 1,044 NCTR/FDA 2006-08-15 Homo sapiens
Homo sapiens
RT-PCR RT-PCR, TaqMan Human MAQC (TAQ),
40 GPL9732 Taqman Homo sapiens microRNA Low density arrays (TLDA) panel B 288 Hillman Cancer Center, University of Pittsburgh 2009-11-30 Applied Biosystems, Foster City, CA Homo sapiens
Homo sapiens
RT-PCR RT-PCR, Taqman Homo sapiens microRNA Low density arrays (TLDA) panel B,
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