Gene Expression Omnibus (GEO) Overview

DataSet	:	Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample	:	Biological materials.
platform	:	Methods or instruments used for the gene expression profilings.

All
(11,528)

SAGE NlaIII
(83)

SAGE RsaI
(1)

RT-PCR
(144)

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	Platform ID	Title	Number of the probes	Institute	Submission date	Manufacturer	Species	Platform class	Reasoning of the classification Keywords used for the classification are shown with bold font.
21	GPL14938	TaqMan qRT-PCR Homo sapiens Low-Density Array	96	Univ of California San Diego	2011-11-29	Applied Biosystem	Homo sapiens	RT-PCR	RT-PCR, TaqMan qRT-PCR Homo sapiens Low-Density Array, TaqManÃ‚Â® Gene Signature Array Configuration - Human Angiogenesis Array
22	GPL13680	Taqman qRT-PCR Homo sapiens 384	384	University of Namur	2011-06-02	Applied Biosystems	Homo sapiens	RT-PCR	RT-PCR, Taqman qRT-PCR Homo sapiens 384, TaqMan-based qRT-PCR assay
23	GPL9019	TaqMan MicroRNA Assays Human Panel Early Access Kit (Applied Biosystems)	157	University of Modena and Reggio Emilia	2009-08-11		Homo sapiens	RT-PCR	RT-PCR, TaqMan MicroRNA Assays Human Panel Early Access Kit (Applied Biosystems), The original platform is composed of two 96-well plates (Plate A and Plate B) whose content is here merged into one single platform. Applied Biosystems Catalog Number: 4365409. Currently no more available for sale.
24	GPL10522	TaqMan Human MicroRNA Array v1.0 (Early Access)	384	University Health Network	2010-06-09	Applied Biosystems	Homo sapiens	RT-PCR	RT-PCR, TaqMan Human MicroRNA Array v1.0 (Early Access),
25	GPL4097	TaqMan Human MAQC (TAQ)	1,044	NCTR/FDA	2006-08-15		Homo sapiens	RT-PCR	RT-PCR, TaqMan Human MAQC (TAQ),
26	GPL9732	Taqman Homo sapiens microRNA Low density arrays (TLDA) panel B	288	Hillman Cancer Center, University of Pittsburgh	2009-11-30	Applied Biosystems, Foster City, CA	Homo sapiens	RT-PCR	RT-PCR, Taqman Homo sapiens microRNA Low density arrays (TLDA) panel B,
27	GPL9731	Taqman Homo sapiens microRNA Low density arrays (TLDA) panel A	378	Hillman Cancer Center, University of Pittsburgh	2009-11-30	Applied Biosystems, Foster City, CA	Homo sapiens	RT-PCR	RT-PCR, Taqman Homo sapiens microRNA Low density arrays (TLDA) panel A,
28	GPL11239	TaqMan Array miRNA Card-A	384	University of Chicago	2010-11-23	Applied Biosystems	Homo sapiens	RT-PCR	RT-PCR, TaqMan Array miRNA Card-A, format: 384-well plate
29	GPL13987	Taqman Array Human MicroRNA A Card v2.0	384	Tokyo Medical University	2011-07-28		Homo sapiens	RT-PCR	RT-PCR, Taqman Array Human MicroRNA A Card v2.0, Format: 384-well plate Manufacturer: Applied Biosystems See manufacturer's website (http://www.appliedbiosystems.com/).
30	GPL6933	Superarray Signal Transduction PathwayFinder PCR Array APHS-014b	96	University of Illinois	2008-06-04		Homo sapiens	RT-PCR	RT-PCR, Superarray Signal Transduction PathwayFinder PCR Array APHS-014b, The Human Signal Transduction PathwayFinderÃ¢â€žÂ¢ RTÃ‚Â²ProfilerÃ¢â€žÂ¢ PCR Array profiles the expression of 84 key genes representative of 18 different signal transduction pathways listed below. Using real-time PCR, you can easily and reliably analyze the expression of a focused panel of genes related to any of the 18 signal transduction pathways that may be involved in your favorite biological response.
31	GPL7747	SuperArray Mouse Th1-Th2-Th3 PCR Array PCR Array	96	University of Southern California	2008-12-05		Mus musculus	RT-PCR	RT-PCR, SuperArray Mouse Th1-Th2-Th3 PCR Array PCR Array, The Mouse Th1-Th2-Th3 RTÃ‚Â² ProfilerÃ¢â€žÂ¢ PCR Array profiles the expression of 84 genes related to the three classes of helper T cells (CD4+ T lymphocytes): Th1, Th2, and Th3. This array includes cytokine genes representative of Th1, Th2 and Th3 cells. The array also contains genes encoding transcriptional factors that regulate the expression of these cytokines as well as other markers of CD4+ T lymphocytes. Genes involved in immune cell activation, in the Th1 and Th2 type immune responses, and genes involved in the antimicrobial humoral response are included on this array as well as other immune response-related genes. Using real-time PCR, you can easily and reliably analyze expression of a focused panel of genes related to helper T cells with this array.
32	GPL7726	SuperArray Mouse Th-17 pathway PCR Array	96	University of Southern California	2008-12-02		Mus musculus	RT-PCR	RT-PCR, SuperArray Mouse Th-17 pathway PCR Array, The Mouse Th17 for Autoimmunity & Inflammation RTÃ‚Â²ProfilerÃ¢â€žÂ¢ PCR Array profiles the expression of 84 genes related to the Th17 Regulatory Network. Th17 is a newly defined subset of CD4(+) T cells that is distinct from the traditional Th1, Th2 and Treg. Th17 is highly proinflammatory and induces severe autoimmunity. This array contains surface molecules, cytokines and receptors, chemokines, matrix metalloproteinases, cell signaling molecules and transcriptional factors. Using real-time PCR, you can easily and reliably analyze expression of a focused panel of genes related to the Th17 regulatory network with this array.
33	GPL6926	Superarray DNA damage signaling APHS-029B	96	University of Illinois	2008-06-03		Homo sapiens	RT-PCR	RT-PCR, Superarray DNA damage signaling APHS-029B, The Human DNA Damage Signaling RTÃ‚Â² ProfilerÃ¢â€žÂ¢ PCR Array profiles the expression of 84 genes involved in DNA damage signaling pathways. The genes featured are those associated with the ATR/ATM signaling network and transcriptional targets of DNA damage response. DNA damage can result in cell cycle arrest, apoptosis, and the stabilization and repair of the cellular genome.
34	GPL16954	Source MDx Precision Profiles_Human	168	Mount Sinai School of Medicine	2013-04-02	Applied Biosystems	Homo sapiens	RT-PCR	RT-PCR, Source MDx Precision Profiles_Human, PCR assay Applied BiosystemÃ¢â‚¬â„¢s TaqManÃ‚Â® Universal PCR Master Mix (catalog number: 4304437) and Source MDxÃ‚Â® proprietary primer-probe sets (Precision ProfilesÃ¢â€žÂ¢)
35	GPL11111	Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 0.3K	288	J Craig Venter Institute	2010-10-25		Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S	RT-PCR	RT-PCR, Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 0.3K,
36	GPL13138	Salivary_qPCR_Fluidigm	38	SRI International	2011-02-08	Fluidigm	Homo sapiens	RT-PCR	RT-PCR, Salivary_qPCR_Fluidigm,
37	GPL16315	SABiosciences RT2 miRNA PCR Array Human Cancer	88	Univ of California, San Francisco	2012-11-21	SABiosciences	Homo sapiens	RT-PCR	RT-PCR, SABiosciences RT2 miRNA PCR Array Human Cancer, PCR assay SABiosciences RT2 Profiler panel of PCR assays.
38	GPL16589	SABiosciences Real-time quantitative PCR analysis PAHS-135Z	96	UNIVERSITY OF MINNESOTA	2013-02-04	SABiosciences	Homo sapiens	RT-PCR	RT-PCR, SABiosciences Real-time quantitative PCR analysis PAHS-135Z, PCR assay SABiosciences RTÃ‚Â² Profiler panel of PCR assays.
39	GPL13236	SABiosciences Mus musculus RT-PCR 384 (PAMM - 3803E)	384	NCI-Frederick	2011-02-28	SABiosciences	Mus musculus	RT-PCR	RT-PCR, SABiosciences Mus musculus RT-PCR 384 (PAMM - 3803E),
40	GPL13745	SABiosciences Mouse Wnt Signaling Pathway RTÃ‚Â² ProfilerÃ¢â€žÂ¢ PCR Array (PAMM-043A)	89	Kawasaki Medical School	2011-06-17	SABiosciences	Mus musculus	RT-PCR	RT-PCR, SABiosciences Mouse Wnt Signaling Pathway RTÃ‚Â² ProfilerÃ¢â€žÂ¢ PCR Array (PAMM-043A),

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