Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(521,594)		   Primates
(5,069)		   Rodents
(189,292)		   Mammals
(16,929)		   Vertebrates
(18,759)		   Invertebrates
(38,793)		   Plants
(93,301)		   Bacteria
(39,613)		   Viruses
(1,263)		   Phages
(101)		   Unclassified
(5,497)		   All
(931,947)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(391,468)		   Tiling Array
(22,222)		   cDNA Array
(104,397)		   Oligo Array
(247,270)		   Bead Array
(112,023)		   Protein Array
(5)		   Antibody
(1,160)		   RT-PCR
(4,486)		   HT-Seq
(39,106)		   Other
(7,515)		   All
(931,947)		  
  brain
(348)		   blood
(223)		   connective
(120)		   reproductive
(104)		   muscular
(67)		   digestive
(70)		   liver
(29)		   lung
(108)		   urinary
(44)		   endo/exo-crine
(210)		   embryo
(115)		   adult aerial structure
(23)		   young aerial structure
(1)		   root
(8)		   meristem/growing tissue
(7)		   flower/sexual organ
(3)		   seed/fruit/grain
(3)		   pooled
(95)		   unclassified
(105)		   all
(1,683)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
41 GSM458901 Vehicle 31,764 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 unclassified source_name:Cell line title:Vehicle description:LongSAGE libraries were constructed with 5ug of total RNA using the Invitrogen I-SAGE Long kit.
42 GSM414746 tag of rice booting panicle 793,637 Beijing Genomics Institute at Shenzhen 2009-06-08 [SAGE NlaIII] SAGE:17:NlaIII:Oryza sativa (GPL8684) SAGE Oryza sativa
Oryza sativa		 other flower/sexual organ tag of rice booting panicle
43 GSM414747 tag of rice callus 717,904 Beijing Genomics Institute at Shenzhen 2009-06-08 [SAGE NlaIII] SAGE:17:NlaIII:Oryza sativa (GPL8684) SAGE Oryza sativa
Oryza sativa		 callus callus of rice
44 GSM404329 Mus musculus hematopoietic stem cell 31,380 Kyungpook National University 2009-05-17 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus		 peripheral blood Mus musculus, C57BL/6, Lin- c-kit+ Hematopoietic stem cell
45 GSM389906 Total blood mRNA profile from 14 pooled individuals (7 males + 7 females) before EPO treatment 8,963 Human Genomic Institut 2009-04-07 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 peripheral blood total blood - control
46 GSM389908 Total blood mRNA profile from 14 pooled individuals (7 males + 7 females) after EPO treatment 8,851 Human Genomic Institut 2009-04-07 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 peripheral blood total blood - after EPO treatment
47 GSM389907 Total blood mRNA profile from 14 pooled individuals (7 males + 7 females) during EPO treatment 6,069 Human Genomic Institut 2009-04-07 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens		 peripheral blood total blood - during EPO treatment
48 GSM384141 LSAGE_Testis_Embryonal_Carcinoma_CL_hs0212 795,025 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 testis testis, cancer, cell line, long sage, slx-sage, solexa sage, adult, male
49 GSM384135 LSAGE_Skin_Normal_B_hs0271 382,357 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 skin skin, normal, bulk, long sage, slx-sage, solexa sage, male
50 GSM384134 LSAGE_Skin_Melanoma_B_hs0276 378,065 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 skin skin, cancer, bulk, long sage, slx-sage, solexa sage, male, melanoma
51 GSM384127 LSAGE_Skin_Cancer_B_hs0279 356,844 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 skin skin, cancer, bulk, long sage, slx-sage, solexa sage, male, basal cell carcinoma
52 GSM384109 LSAGE_Eye_Retinoblastoma_B_hs0389 331,358 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 eye eye, cancer, bulk, retinoblastoma, long sage, slx-sage, solexa sage, female
53 GSM384149 LSAGE_Vein_normal_B_hs0237 322,395 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 vein LSAGE_Vein_normal_B_hs0237
54 GSM384146 LSAGE_Uterus_normal_B_hs0195 305,922 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 uterus uterus, normal, bulk, long sage, slx-sage, solexa sage, female
55 GSM384118 LSAGE_Lymph_node_Lymphoma_B_hs0196 305,379 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 lymphnode lymph node, cancer, bulk, long sage, slx-sage, solexa sage, lymphoma
56 GSM384144 LSAGE_Urothelium_normal_B_hs0239 300,871 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 unclassified source_name:other, normal, bulk, long sage, slx-sage, solexa sage title:LSAGE_Urothelium_normal_B_hs0239 description:CGAP_Numeric_library_ID: 2255 Tagging_enzyme: Mme I Library_producer: Martin Hirst, Functional Genomics Lab Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, Canada
57 GSM384104 LSAGE_Embryonic_stem_cell_normal_CL_hs0238 293,179 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 embryo stem cell, normal, antibody purified, long sage, slx-sage, solexa sage, male
58 GSM384133 LSAGE_Skin_Melanoma_B_hs0275 282,858 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 skin skin, cancer, bulk, long sage, slx-sage, solexa sage, male, melanoma
59 GSM384129 LSAGE_Skin_Cancer_B_hs0283 281,735 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 skin skin, cancer, bulk, long sage, slx-sage, solexa sage, male, squamous cell carcinoma
60 GSM384131 LSAGE_Skin_Melanoma_B_hs0273 278,074 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens		 skin skin, cancer, bulk, long sage, slx-sage, solexa sage, male, melanoma
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