Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.

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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(615,734)
  Primates
(5,814)
  Rodents
(225,055)
  Mammals
(20,968)
  Vertebrates
(22,581)
  Invertebrates
(46,584)
  Plants
(107,706)
  Bacteria
(45,091)
  Viruses
(1,432)
  Phages
(112)
  Unclassified
(6,986)
  All
(1,101,311)
 
  SAGE NlaIII
(1,697)
  SAGE RsaI
(3)
  SAGE Sau3A
(54)
  MPSS
(507)
  GeneChip
(441,758)
  Tiling Array
(24,730)
  cDNA Array
(109,124)
  Oligo Array
(288,250)
  Bead Array
(148,432)
  Protein Array
(5)
  Antibody
(1,287)
  RT-PCR
(6,509)
  HT-Seq
(64,850)
  Other
(13,899)
  All
(1,101,311)
 
  brain
(348)
  blood
(229)
  connective
(120)
  reproductive
(104)
  muscular
(67)
  digestive
(75)
  liver
(29)
  lung
(108)
  urinary
(0)
  endo/exo-crine
(210)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(1)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(95)
  unclassified
(108)
  all
(1,697)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
41 GSM458903 Responsive to androgen-deprivation; Biological replicate #1 96,973 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
prostate In vivo LNCaP Hollow Fibre model
42 GSM458909 Responsive to androgen-deprivation; Biological replicate #3 91,438 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
prostate In vivo LNCaP Hollow Fibre model
43 GSM458910 Castration-recurrent; Biological replicate #3 90,675 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
prostate In vivo LNCaP Hollow Fibre model
44 GSM458907 Castration-recurrent; Biological replicate #2 88,249 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
prostate In vivo LNCaP Hollow Fibre model
45 GSM458906 Responsive to androgen-deprivation; Biological replicate 2 84,499 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
prostate In vivo LNCaP Hollow Fibre model
46 GSM458905 Androgen-sensitive; Biological replicate #2 81,850 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
prostate In vivo LNCaP Hollow Fibre model
47 GSM458908 Androgen-sensitive; Biological replicate #3 79,859 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
prostate In vivo LNCaP Hollow Fibre model
48 GSM458902 Androgen-sensitive; Biological replicate #1 79,201 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
prostate In vivo LNCaP Hollow Fibre model
49 GSM458900 R1881 33,385 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
unclassified source_name:Cell line title:R1881 description:LongSAGE libraries were constructed with 5ug of total RNA using the Invitrogen I-SAGE Long kit.
50 GSM458901 Vehicle 31,764 British Columbia Cancer Agency 2009-10-02 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
unclassified source_name:Cell line title:Vehicle description:LongSAGE libraries were constructed with 5ug of total RNA using the Invitrogen I-SAGE Long kit.
51 GSM414746 tag of rice booting panicle 793,637 Beijing Genomics Institute at Shenzhen 2009-06-08 [SAGE NlaIII] SAGE:17:NlaIII:Oryza sativa (GPL8684) SAGE Oryza sativa
Oryza sativa
other flower/sexual organ tag of rice booting panicle
52 GSM414747 tag of rice callus 717,904 Beijing Genomics Institute at Shenzhen 2009-06-08 [SAGE NlaIII] SAGE:17:NlaIII:Oryza sativa (GPL8684) SAGE Oryza sativa
Oryza sativa
callus callus of rice
53 GSM404329 Mus musculus hematopoietic stem cell 31,380 Kyungpook National University 2009-05-17 [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) SAGE Mus musculus
Mus musculus
peripheral blood Mus musculus, C57BL/6, Lin- c-kit+ Hematopoietic stem cell
54 GSM389906 Total blood mRNA profile from 14 pooled individuals (7 males + 7 females) before EPO treatment 8,963 Human Genomic Institut 2009-04-07 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens
peripheral blood total blood - control
55 GSM389908 Total blood mRNA profile from 14 pooled individuals (7 males + 7 females) after EPO treatment 8,851 Human Genomic Institut 2009-04-07 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens
peripheral blood total blood - after EPO treatment
56 GSM389907 Total blood mRNA profile from 14 pooled individuals (7 males + 7 females) during EPO treatment 6,069 Human Genomic Institut 2009-04-07 [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) SAGE Homo sapiens
Homo sapiens
peripheral blood total blood - during EPO treatment
57 GSM384141 LSAGE_Testis_Embryonal_Carcinoma_CL_hs0212 795,025 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
testis testis, cancer, cell line, long sage, slx-sage, solexa sage, adult, male
58 GSM384135 LSAGE_Skin_Normal_B_hs0271 382,357 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
skin skin, normal, bulk, long sage, slx-sage, solexa sage, male
59 GSM384134 LSAGE_Skin_Melanoma_B_hs0276 378,065 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
skin skin, cancer, bulk, long sage, slx-sage, solexa sage, male, melanoma
60 GSM384127 LSAGE_Skin_Cancer_B_hs0279 356,844 National Cancer Institute 2009-03-19 [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) SAGE Homo sapiens
Homo sapiens
skin skin, cancer, bulk, long sage, slx-sage, solexa sage, male, basal cell carcinoma
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