Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(18,625)		   Primates
(206)		   Rodents
(12,612)		   Mammals
(782)		   Vertebrates
(1,156)		   Invertebrates
(4,045)		   Plants
(6,642)		   Bacteria
(2,980)		   Viruses
(50)		   Phages
(4)		   Unclassified
(287)		   All
(47,440)		  
  SAGE NlaIII
(224)		   SAGE RsaI
(1)		   SAGE Sau3A
(16)		   MPSS
(56)		   GeneChip
(17,192)		   Tiling Array
(3,579)		   cDNA Array
(5,850)		   Oligo Array
(12,094)		   Bead Array
(3,016)		   Protein Array
(1)		   Antibody
(39)		   RT-PCR
(246)		   HT-Seq
(4,931)		   Other
(183)		   All
(47,440)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
41 Hepatocellular Carcinoma Differential Network (SNP profiling of tumor and non-tumor tissue) (GSE28127) [Bead Array] Illumina HumanHap650Yv3 Genotyping BeadChip (HumanHap650Yv3_A) (GPL6987) Merck 2011-03-23 Homo sapiens
Homo sapiens		 265,028,118
(660,918 x 401) 		401 by_platform
by_series
42 Whole-transcript and exon-level expression data for human primary and metastatic prostate cancer samples and control normal adjacent benign prostate (GSE21034) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) Memorial Sloan-Kettering Cancer Center 2010-03-23 Homo sapiens
Homo sapiens		 264,948,675
(1,432,155 x 185) 		185 by_platform
by_series
43 Integrative genomic profiling of human prostate cancer (GSE21032) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) Memorial Sloan-Kettering Cancer Center 2010-03-23 Homo sapiens
Homo sapiens		 264,948,675
(1,432,155 x 185) 		185 by_platform
by_series
44 Cancer Genome Anatomy Project (CGAP) Human SAGE (GSE15309) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) National Cancer Institute 2009-03-19 Homo sapiens
Homo sapiens		 262,074,477
(801,451 x 327) 		80 30 18 28 4 25 10 7 5 76 9 33 2 by_platform
by_series
45 Cancer Genome Anatomy Project (CGAP) SAGE Libraries (GSE14) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) National Cancer Institute 2001-11-29 Homo sapiens
Homo sapiens		 262,074,477
(801,451 x 327) 		80 30 18 28 4 25 10 7 5 76 9 33 2 by_platform
by_series
46 Exon arrays of ENCODE tier 1, tier 2 and tier 3 cell types (GSE19090) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) ENCODE DCC 2009-11-18 Homo sapiens
Homo sapiens		 260,652,210
(1,432,155 x 182) 		18 31 39 4 9 6 2 6 7 7 5 36 12 by_platform
by_series
47 Efficient targeted transcript discovery via array-based normalization of RACE libraries (GSE11433) [GeneChip] AFFYMETRIX Human ENCODE Chromosomes 1,2,4,5,6,7,8,9,10,11,12,13,14,15,16,18,19,20,21,X v2.0 (GPL6860) Affymetrix, Inc. 2008-05-13 Homo sapiens
Homo sapiens		 257,235,840
(2,143,632 x 120) 		10 10 20 20 30 10 10 10 by_platform
by_series
48 Comparison between cell lines from 9 different cancer tissue (NCI-60) (Affymetrix HuEx 1.0) (GSE29682) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) National Institutes of Health 2011-06-01 Homo sapiens
Homo sapiens		 254,923,590
(1,432,155 x 178) 		15 17 26 21 21 24 21 22 11 by_platform
by_series
49 Identification of Common Genetic Variants that Account for Transcript Isoform Variation between Human Populations (GSE9703) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) University of Chicago 2007-11-27 Homo sapiens
Homo sapiens		 252,059,280
(1,432,155 x 176) 		176 by_platform
by_series
50 Tissue-specific genetic regulation of splicing and expression (GSE30483) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) Duke University 2011-07-07 Homo sapiens
Homo sapiens		 247,762,815
(1,432,155 x 173) 		93 80 by_platform
by_series
51 Tissue-specific genetic regulation of splicing and expression (exon-level) (GSE30422) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) Duke University 2011-07-05 Homo sapiens
Homo sapiens		 247,762,815
(1,432,155 x 173) 		93 80 by_platform
by_series
52 Efficient targeted transcript discovery via array-based normalization of RACE libraries (GSE11433) [GeneChip] AFFYMETRIX Human Chromosomes 21 & 22 v2.0b (GPL6861) Affymetrix, Inc. 2008-05-13 Homo sapiens
Homo sapiens		 245,429,072
(2,191,331 x 112) 		14 16 6 10 6 8 6 4 6 14 18 4 by_platform
by_series
53 DNA methylation data from non-immortalized lymphocyte samples from participants of the AGES Reykjavik Study (GSE23858) [Oligo Array] NimbleGen Human 2.1M array (GPL9275) Johns Hopkins University 2010-08-27 Homo sapiens
Homo sapiens		 242,189,472
(2,162,406 x 112) 		112 by_platform
by_series
54 Stress-induced changes in the Arabidopsis thaliana transcriptome analyzed using whole genome tiling arrays (GSE13584) [Tiling Array] AtTile1R to Arabidopsis Tiling 1.0R (GPL1980) Max Planck Institute for Developmental Biology 2008-11-13 Arabidopsis thaliana
Arabidopsis thaliana		 241,204,080
(6,184,720 x 39) 		39 by_platform
by_series
55 The Genome Wide Structure of the Jewish People (GSE21478) [Bead Array] Illumina Human610-Quad v1.0 BeadChip (GPL8887) Estonian Biocentre 2010-04-22 Homo sapiens
Homo sapiens		 236,563,281
(620,901 x 381) 		381 by_platform
by_series
56 Genome-wide screening of genomic alterations and transcriptional modulation in non-smoking female lung cancer in Taiwan (GSE33356) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) National Taiwan University, Taiwan 2011-10-31 Homo sapiens
Homo sapiens		 229,456,868
(1,880,794 x 122) 		122 by_platform
by_series
57 Affymetrix SNP array data for Non-Smoking Female Lung Cancer in Taiwan (GSE33355) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) National Taiwan University, Taiwan 2011-10-31 Homo sapiens
Homo sapiens		 229,456,868
(1,880,794 x 122) 		122 by_platform
by_series
58 Expression and SNP array data for oral squamous cell carcinoma (GSE25104) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Chang Gung Memorial Hospital 2010-11-03 Homo sapiens
Homo sapiens		 229,456,868
(1,880,794 x 122) 		10 112 by_platform
by_series
59 Affymetrix SNP array data for oral squamous cell carcinoma (GSE25103) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Chang Gung Memorial Hospital 2010-11-03 Homo sapiens
Homo sapiens		 229,456,868
(1,880,794 x 122) 		10 112 by_platform
by_series
60 Cancer Genome Anatomy Project (CGAP) Human Solexa LongSAGE (GSE15314) [SAGE NlaIII] SAGE:17:NlaIII:Homo sapiens (GPL1485) National Cancer Institute 2009-03-19 Homo sapiens
Homo sapiens		 223,961,652
(6,221,157 x 36) 		1 8 15 4 5 2 1 by_platform
by_series
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