Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(17,885)		   Primates
(199)		   Rodents
(12,016)		   Mammals
(754)		   Vertebrates
(1,115)		   Invertebrates
(3,796)		   Plants
(6,479)		   Bacteria
(2,920)		   Viruses
(51)		   Phages
(4)		   Unclassified
(249)		   All
(45,516)		  
  SAGE NlaIII
(224)		   SAGE RsaI
(1)		   SAGE Sau3A
(16)		   MPSS
(56)		   GeneChip
(16,580)		   Tiling Array
(3,529)		   cDNA Array
(5,792)		   Oligo Array
(11,628)		   Bead Array
(2,848)		   Protein Array
(1)		   Antibody
(37)		   RT-PCR
(223)		   HT-Seq
(4,411)		   Other
(158)		   All
(45,516)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
81 SNP data from blood DNAs of patients with gastric cancer (GSE26853) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) KRIBB 2011-01-25 Homo sapiens
Homo sapiens		 178,675,430
(1,880,794 x 95) 		95 by_platform
by_series
82 Population genetic properties of differentiated human copy number polymorphisms (GSE26450) [Oligo Array] Agilent Eichler Human CNP 180K v3.0 (GPL11387) Univerisity of Washington 2011-01-05 Homo sapiens
Homo sapiens		 171,293,360
(180,880 x 947) 		947 by_platform
by_series
83 Affymetrix SNP6.0 microarray data - Myelodysplastic syndromes (GSE23300) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) King's College 2010-07-28 Homo sapiens
Homo sapiens		 171,152,254
(1,880,794 x 91) 		91 by_platform
by_series
84 Genome-wide Analyses of Diffuse Intrinsic Pontine Gliomas (GSE26576) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) St Jude Children's Research Institute 2011-01-12 Homo sapiens
Homo sapiens		 167,390,666
(1,880,794 x 89) 		51 4 34 by_platform
by_series
85 Genotype, haplotype and copy number variation in worldwide human populations. (GSE10331) [Bead Array] Illumina HumanHap550 Genotyping BeadChip v1 (GPL6433) National Institutue on Aging, NIH 2008-01-30 Homo sapiens
Homo sapiens		 162,718,136
(555,352 x 293) 		293 by_platform
by_series
86 Stability of miRNA in FFPE tumour samples exhibiting degraded mRNA [Cervix samples series 1] (GSE39013) [GeneChip] [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] (GPL5188) Paterson Institute for Cancer Research 2012-06-29 Homo sapiens
Homo sapiens		 161,833,515
(1,432,155 x 113) 		113 by_platform
by_series
87 Broad chromosomal domains of histone modification patterns in C. elegans (GSE26186) [Tiling Array] 080922_modEncode_Caenorhabditis elegans_2M tiling chip_HX1 (GPL8647) Ontario Institute for Cancer Research 2010-12-20 Caenorhabditis elegans
Caenorhabditis elegans		 160,650,000
(2,142,000 x 75) 		10 1 64 by_platform
by_series
88 Affymetrix SNP array data for Monoclonal Gammopathies samples (GSE31339) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Hospital Universitario de Salamanca 2011-08-11 Homo sapiens
Homo sapiens		 157,986,696
(1,880,794 x 84) 		84 by_platform
by_series
89 Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae (GSE11611) [GeneChip] [Soybean] Affymetrix Soybean Genome Array (GPL4592) Virginia Tech 2008-05-29 Glycine max
Glycine max		 154,270,740
(61,170 x 2,522) 		6 2,516 by_platform
by_series
90 Distinct genomic differences in prostate cancer between Western countries and China (GSE18333) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) Queen Mary 2009-09-29 Homo sapiens
Homo sapiens		 154,225,108
(1,880,794 x 82) 		82 by_platform
by_series
91 Epigenetic chromatin states uniquely define the developmental plasticity of murine hematopoietic stem cells (GSE18737) [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) Lund University 2009-10-26 Mus musculus
Mus musculus		 151,762,784
(2,137,504 x 71) 		17 54 by_platform
by_series
92 miniChIP-chip of murine hematopoietic stem cells and progeny with H3K4me3, H3K79me2, H3K9/14ac, H3K27me3, H3K9me3, PolII (GSE18734) [Oligo Array] NimbleGen Mouse MM8 Deluxe Promoter Array (GPL9485) Lund University 2009-10-26 Mus musculus
Mus musculus		 151,762,784
(2,137,504 x 71) 		17 54 by_platform
by_series
93 DNA Copy-Number Alterations in clear-cell Renal Cell Carcinoma (ccRCC) Tumors and Tumorgrafts for samples deficient in BAP1 or PBRM1 (GSE25540) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) UT Southwestern Medical Center 2010-11-22 Homo sapiens
Homo sapiens		 150,463,520
(1,880,794 x 80) 		21 4 3 26 26 by_platform
by_series
94 Structural Variation of Chromosomes in Autism Spectrum Disorder. (GSE9222) [GeneChip] [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array (GPL3718) The Hospital for Sick Children 2007-10-03 Homo sapiens
Homo sapiens		 148,745,646
(262,338 x 567) 		567 by_platform
by_series
95 Histone H3 modifications ChIP on chip (GSE7907) [Tiling Array] AtTile1F to Arabidopsis Tiling 1.0F (GPL1979) Michigan State University 2007-05-25 Arabidopsis thaliana
Arabidopsis thaliana		 148,433,280
(6,184,720 x 24) 		24 by_platform
by_series
96 High Resolution Mapping and Functional Analysis of the Methylome in Arabidopsis (mCIP, MBD) (GSE5094) [Tiling Array] AtTile1F to Arabidopsis Tiling 1.0F (GPL1979) University of California, Los Angeles 2006-06-16 Arabidopsis thaliana
Arabidopsis thaliana		 148,433,280
(6,184,720 x 24) 		24 by_platform
by_series
97 Human Variation Panel: Gene Expression and Genotype (GSE24277) [Bead Array] Illumina HumanExon510-Sv1 DNA Analysis BeadChip (HumanExon510Sv1_D) (GPL6988) Mayo Clinic 2010-09-22 Homo sapiens
Homo sapiens		 147,269,952
(511,354 x 288) 		288 by_platform
by_series
98 Genome-wide SNP array data from Human Variation Panel by Illumina 510S (GSE24245) [Bead Array] Illumina HumanExon510-Sv1 DNA Analysis BeadChip (HumanExon510Sv1_D) (GPL6988) Mayo Clinic 2010-09-21 Homo sapiens
Homo sapiens		 147,269,952
(511,354 x 288) 		288 by_platform
by_series
99 DNA methylation data from mouse iPS cells, ES cells, and ntES cells (GSE22851) [Oligo Array] NimbleGen Mouse 2.1M array [Feinberg_MM8_Me_HX1] (GPL10680) Johns Hopkins University School of Medicine 2010-07-09 Mus musculus
Mus musculus		 147,186,816
(2,164,512 x 68) 		68 by_platform
by_series
100 Minor clone provides a reservoir for relapse in multiple myeloma (GSE37469) [GeneChip] [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array (GPL6801) ICO - UMGC 2012-04-20 Homo sapiens
Homo sapiens		 139,178,756
(1,880,794 x 74) 		2 72 by_platform
by_series
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