Gene Expression Omnibus (GEO) Overview Version´╝Ü2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
RSS
Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(3,985)
  Primates
(80)
  Rodents
(1,907)
  Mammals
(359)
  Vertebrates
(450)
  Invertebrates
(1,139)
  Plants
(2,490)
  Bacteria
(1,901)
  Viruses
(90)
  Phages
(11)
  Unclassified
(542)
  All
(13,032)
 
  SAGE NlaIII
(83)
  SAGE RsaI
(1)
  SAGE Sau3A
(5)
  MPSS
(18)
  GeneChip
(809)
  Tiling Array
(1,310)
  cDNA Array
(2,770)
  Oligo Array
(5,679)
  Bead Array
(210)
  Protein Array
(1)
  Antibody
(28)
  RT-PCR
(209)
  HT-Seq
(1,710)
  Other
(187)
  All
(13,032)
 
[1]      «      1   |   2   |   3   |   4   |   5      »      [652]
Platform ID Title Number of the probes Institute Submission date Manufacturer Species Platform class Reasoning of the classification
Keywords used for the classification are shown with bold font.
21 GPL16720 Affymetrix Maize Genome Array [CDF:SYNG007a520046] 82,662 University of Guelph 2013-02-25 Affymetrix Zea mays
Zea mays
GeneChip in situ oligonucleotide, Affymetrix Maize Genome Array [CDF:SYNG007a520046], custom microarray with 82,661 probe-sets and 1,322,551 probes. The microarray platform was annotated by determining homology between probe sequences and the cDNA sequences for predicted transcripts from the filtered gene set of the 4a.53 release of the B73 genome using BLAST annotations as described in http://dx.doi.org/10.1104/pp.112.213231 The identifiers (in the CLONE_ID column) are gene model IDs from the public maize genome sequencing project: http://maizesequence.org http://maizegdb.org/ SYNG007a520046.cdf
22 GPL17677 Illumina MaizeSNP50 BeadChip 56,110 Technische Universitaet Muenchen 2013-09-03 Illumina, Inc. Zea mays
Zea mays
Bead Array oligonucleotide beads, Illumina MaizeSNP50 BeadChip,
23 GPL11236 Maize oligo array version 1.4 slide set (slides A and B) 54,492 Washington University 2010-11-22 Maize Oligonucleotide Project, University of Arizona; www.maizearray.org Zea mays
Zea mays
Oligo Array spotted oligonucleotide, Maize oligo array version 1.4 slide set (slides A and B),
24 GPL6438 Maize oligonucleotide array 46K version 46,128 Maize Oligonucleotide Array Project 2008-01-30 The University of Arizona Zea mays
Zea mays
Oligo Array spotted oligonucleotide, Maize oligonucleotide array 46K version, Spotted 70-mer oligo array on glass. The maize array set 46K version contains ~46,000 unique probes from maize
25 GPL1462 SAGE:17:NlaIII:Zea mays 44,870 2004-09-21 Zea mays
Zea mays
SAGE NlaIII SAGE NlaIII, SAGE:17:NlaIII:Zea mays, This is a virtual platform for longSAGE 17 libraries generated for Zea mays using NlaIII as an anchor enzyme. Platform_anchor: NlaIII
26 GPL18328 Biogemma NimbleGen Maize Custom Expression Array [130114_Zea_Mays_45K_BGA] 44,829 INRA - Institut National de la Recherche Agronomique 2014-02-24 NimbleGen Zea mays
Zea mays
Oligo Array in situ oligonucleotide, Biogemma NimbleGen Maize Custom Expression Array [130114_Zea_Mays_45K_BGA],
27 GPL7209 Zea mays 1x44K Agilent array - designed by Walbot Lab 44,290 Stanford University 2008-08-26 Agilent Zea mays
Zea mays
Oligo Array in situ oligonucleotide, Zea mays 1x44K Agilent array - designed by Walbot Lab,
28 GPL6460 Universidad Nacional de Rosario Zea Mays 43K 43,451 Universidad Nacional de Rosario 2008-02-05 Agilent Technologies Zea mays
Zea mays
Oligo Array in situ oligonucleotide, Universidad Nacional de Rosario Zea Mays 43K,
29 GPL7444 Agilent-016047 Walbot Zea mays 4x44K array 43,451 Stanford University 2008-10-08 Agilent Zea mays
Zea mays
Oligo Array in situ oligonucleotide, Agilent-016047 Walbot Zea mays 4x44K array, designed by Walbot Lab (same probes as 1x44)
30 GPL16089 Agilent-016047 Maize Gene Expression Microarray 4x44K (Probe name version) 42,095 Agilent Technologies 2012-09-21 Agilent Technologies Zea mays
Zea mays
Oligo Array in situ oligonucleotide, Agilent-016047 Maize Gene Expression Microarray 4x44K (Probe name version), The ID column includes the Agilent Probe Names.
31 GPL14913 Agilent-025271 Zea mays Mais_array_v1 [Probe Name version] 41,838 Heinrich Heine University Duesseldorf 2011-11-22 Agilent Technologies Zea mays
Zea mays
Oligo Array in situ oligonucleotide, Agilent-025271 Zea mays Mais_array_v1 [Probe Name version], Mais array, v1, basierend auf Design 08/2009 Arrays of this design have barcodes that begin with 16025271 or 2525271. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
32 GPL1988 Maize oligo array version 1.1 array A 32,448 The Institute for Genomic Research 2005-04-25 Zea mays
Zea mays
Oligo Array spotted oligonucleotide, Maize oligo array version 1.1 array A, Spotted oligo array on glass. The whole maize array set 1.1 version contains 55550 unique probes from maize and array A contains 28833 of them. The number of total spots including empty and controls is 32448.
33 GPL1989 Maize oligo array version 1.1 array B 32,448 The Institute for Genomic Research 2005-04-25 Zea mays
Zea mays
Oligo Array spotted oligonucleotide, Maize oligo array version 1.1 array B, Spotted oligo array on glass. The whole maize array set 1.1 version contains 55550 unique probes from maize and array B contains 27109 of them. The number of total spots including empty and controls is 32448.
34 GPL1990 Maize oligo array version 1.2 array A 32,448 The Institute for Genomic Research 2005-04-25 Zea mays
Zea mays
Oligo Array spotted oligonucleotide, Maize oligo array version 1.2 array A, Spotted oligo array on glass. The whole maize array set 1.2 version contains 56310 unique probes from maize and array A contains 29132 of them. The number of total spots including empty and controls is 32448.
35 GPL1991 Maize oligo array version 1.2 array B 32,448 The Institute for Genomic Research 2005-04-25 Zea mays
Zea mays
Oligo Array spotted oligonucleotide, Maize oligo array version 1.2 array B, Spotted oligo array on glass. The whole maize array set 1.2 version contains 56310 unique probes from maize and array B contains 27190 of them. The number of total spots including empty and controls is 32448.
36 GPL1992 Maize oligo array version 1.3 array A 32,448 The Institute for Genomic Research 2005-04-25 Zea mays
Zea mays
Oligo Array spotted oligonucleotide, Maize oligo array version 1.3 array A, Spotted oligo array on glass. The whole maize array set 1.3 version contains 56310 unique probes from maize and array A contains 29132 of them. The number of total spots including empty and controls is 32448.
37 GPL1993 Maize oligo array version 1.3 array B 32,448 The Institute for Genomic Research 2005-04-25 Zea mays
Zea mays
Oligo Array spotted oligonucleotide, Maize oligo array version 1.3 array B, Spotted oligo array on glass. The whole maize array set 1.3 version contains 56310 unique probes from maize and array B contains 27190 of them. The number of total spots including empty and controls is 32448.
38 GPL1994 Maize oligo array version 1.4 array A 32,448 The Institute for Genomic Research 2005-04-25 Zea mays
Zea mays
Oligo Array spotted oligonucleotide, Maize oligo array version 1.4 array A, Spotted oligo array on glass. The whole maize array set 1.4 version contains 56310 unique probes from maize and array A contains 29132 of them. The number of total spots including empty and controls is 32448.
39 GPL1995 Maize oligo array version 1.4 array B 32,448 The Institute for Genomic Research 2005-04-25 Zea mays
Zea mays
Oligo Array spotted oligonucleotide, Maize oligo array version 1.4 array B, Spotted oligo array on glass. The whole maize array set 1.4 version contains 56310 unique probes from maize and array B contains 27190 of them. The number of total spots including empty and controls is 32448.
40 GPL5439 Maize oligo array version 1.9 array A 32,448 Plant Genomics 2007-06-27 University of Arizona Zea mays
Zea mays
Oligo Array spotted oligonucleotide, Maize oligo array version 1.9 array A, Spotted oligo array on glass. The whole maize array set 1.9 version contains 56310 unique probes from maize and array A contains 29270 of them. The number of total spots including empty and controls is 32448.
[1]      «      1   |   2   |   3   |   4   |   5      »      [652]