Gene Expression Omnibus (GEO) Overview Version:2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(226)
  Primates
(0)
  Rodents
(95)
  Mammals
(8)
  Vertebrates
(9)
  Invertebrates
(17)
  Plants
(69)
  Bacteria
(39)
  Viruses
(0)
  Phages
(0)
  Unclassified
(4)
  All
(467)
 
  SAGE NlaIII
(2)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(2)
  GeneChip
(112)
  Tiling Array
(12)
  cDNA Array
(36)
  Oligo Array
(171)
  Bead Array
(96)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(36)
  Other
(0)
  All
(467)
 
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Title Platform Institute Submission date Species Data size
(probes x samples)
Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
101 Notch signaling suppresses the progression of colorectal tumorigenesis (GSE21392) [Bead Array] Illumina mouse-6 v1.1 expression beadchips (GPL6568) Seoul National University 2010-04-19 Mus musculus
Mus musculus
559,536
(46,628 x 12)
12 by_platform
by_series
102 Gene expression changes in Ahnak knockout mice (GSE37218) [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) Seoul National University 2012-04-12 Mus musculus
Mus musculus
426,684
(35,557 x 12)
6 6 by_platform
by_series
103 Ago2 or Dicer knockdown effects on mRNA levels in HeLa (GSE13638) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Seoul National University 2008-11-18 Homo sapiens
Homo sapiens
399,564
(33,297 x 12)
12 by_platform
by_series
104 Effect of miRNA biogenesis factors on mRNA levels (GSE13640) [GeneChip] [HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] (GPL6244) Seoul National University 2008-11-18 Homo sapiens
Homo sapiens
399,564
(33,297 x 12)
12 by_platform
by_series
105 Wild-type versus HBx-transfected mive (GSE12723) [Oligo Array] SNU/Agilent Whole Mouse Genome Array (GenePix version) (GPL7279) Seoul National University 2008-09-10 Mus musculus
Mus musculus
398,610
(44,290 x 9)
9 by_platform
by_series
106 Gene expression profile in selenophosphate synthetase 1 (SPS1) knockdown Drosophila SL2 cell (GSE17685) [GeneChip] [Drosophila_2] Affymetrix Drosophila Genome 2.0 Array (GPL1322) Seoul National University 2009-08-17 Drosophila melanogaster
Drosophila melanogaster
379,040
(18,952 x 20)
20 by_platform
by_series
107 Investigation of Alterations in Gene Expression in the Retina Induced by High-Affinity Peptides targeting vascular endothelial growth factor, AAP and HAN (GSE46378) [Oligo Array] Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version) (GPL11202) Seoul National University 2013-04-25 Mus musculus
Mus musculus
355,374
(39,486 x 9)
9 by_platform
by_series
108 Identification of potential transcripts involved in chicken PGCs development (GSE15830) [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) Seoul National University 2009-04-27 Gallus gallus
Gallus gallus
346,815
(38,535 x 9)
9 by_platform
by_series
109 Expression data from cultured chicken primordial germ cells (PGCs) (GSE22592) [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) Seoul National University 2010-06-27 Gallus gallus
Gallus gallus
346,815
(38,535 x 9)
9 by_platform
by_series
110 Frizzled 4 regulates stemness and invasiveness of migrating glioma cells established by serial in vivo intracranial transplantation (GSE21570) [GeneChip] [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array (GPL570) Seoul National University 2010-04-28 Homo sapiens
Homo sapiens
328,050
(54,675 x 6)
6 by_platform
by_series
111 MPSS profiling of embryonic gonad and primordial germ cells (GSE5909) [MPSS] Chicken mRNA MPSS signatures (GPL4337) Seoul National University 2006-09-25 Gallus gallus
Gallus gallus
284,044
(142,022 x 2)
2 by_platform
by_series
112 A Gene Expression Profile in the Kidney After Cisplatin Treatment (GSE35257) [Bead Array] Illumina MouseWG-6 v2.0 expression beadchip (GPL6887) Seoul National University 2012-01-22 Mus musculus
Mus musculus
271,686
(45,281 x 6)
6 by_platform
by_series
113 Selection of Neural Differentiation-Specific Genes by Comparing Profiles of Random Differentiation (GSE5459) [Oligo Array] Macrogen MAC Mouse 11K Oligo Microarray (GPL2987) Seoul National University 2006-08-04 Mus musculus
Mus musculus
241,920
(11,520 x 21)
21 by_platform
by_series
114 Investigation of Alterations in Gene Expression in the Retina Induced by Intravitreal Injection of SH-42 and SH-80 (GSE46057) [Oligo Array] Agilent-026655 Whole Mouse Genome Microarray 4x44K v2 (Probe Name version) (GPL11202) Seoul National University 2013-04-15 Mus musculus
Mus musculus
236,916
(39,486 x 6)
6 by_platform
by_series
115 Sexually dimorphic gene expression in the chick brain at stage 29 (GSE12268) [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) Seoul National University 2008-07-28 Gallus gallus
Gallus gallus
231,210
(38,535 x 6)
6 by_platform
by_series
116 Identification of transcripts predominantly expressed in cultured chicken primordial germ cells and embryonic fibroblasts. (GSE38168) [GeneChip] [Chicken] Affymetrix Chicken Genome Array (GPL3213) Seoul National University 2012-05-23 Gallus gallus
Gallus gallus
231,210
(38,535 x 6)
3 3 by_platform
by_series
117 Transcriptome profiling for changes upon Lin28a knockdown in mouse embryonic stem cell (A3-1) [Affymetrix] (GSE37113) [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) Seoul National University 2012-04-09 Mus musculus
Mus musculus
213,342
(35,557 x 6)
6 by_platform
by_series
118 LIN28A targets, regulation of microRNA biogenesis, and effect on transcriptome in A3-1 cells (GSE37114) [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) Seoul National University 2012-04-09 Mus musculus
Mus musculus
213,342
(35,557 x 6)
6 by_platform
by_series
119 Wound response in fs-THz-irradiated mouse skin (GSE44671) [GeneChip] [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] (GPL6246) Seoul National University 2013-02-26 Mus musculus
Mus musculus
213,342
(35,557 x 6)
6 by_platform
by_series
120 MeJA-induced gene expression in rice plants (GSE22757) [Oligo Array] SNU Rice Whole Genome 60K Microarray (GPL10641) Seoul National University 2010-07-06 Oryza sativa
Oryza sativa
194,688
(64,896 x 3)
3 by_platform
by_series
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