Gene Expression Omnibus (GEO) Overview Version：2013-04-06Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(502,421)		   Primates
(4,928)		   Rodents
(181,106)		   Mammals
(16,260)		   Vertebrates
(18,263)		   Invertebrates
(37,338)		   Plants
(91,454)		   Bacteria
(39,082)		   Viruses
(1,266)		   Phages
(101)		   Unclassified
(5,242)		   All
(898,944)		  
  SAGE NlaIII
(1,683)		   SAGE RsaI
(3)		   SAGE Sau3A
(54)		   MPSS
(439)		   GeneChip
(377,145)		   Tiling Array
(21,846)		   cDNA Array
(103,476)		   Oligo Array
(239,584)		   Bead Array
(106,999)		   Protein Array
(5)		   Antibody
(1,152)		   RT-PCR
(3,959)		   HT-Seq
(35,574)		   Other
(6,909)		   All
(898,944)		  
  brain
(63,220)		   blood
(169,267)		   connective
(49,492)		   reproductive
(38,618)		   muscular
(24,498)		   digestive
(31,399)		   liver
(51,405)		   lung
(30,850)		   urinary
(18,692)		   endo/exo-crine
(55,952)		   embryo
(18,082)		   adult aerial structure
(12,032)		   young aerial structure
(8,350)		   root
(4,764)		   meristem/growing tissue
(2,248)		   flower/sexual organ
(3,045)		   seed/fruit/grain
(3,128)		   pooled
(52,306)		   unclassified
(261,596)		   all
(898,944)		  
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
21 GSM301562 HEK Input DNA rep1 12,814,371 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:Input DNA title:HEK Input DNA rep1 description:raw sequence 070710_4
22 GSM301564 HEK Input DNA rep2 12,814,371 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:Input DNA title:HEK Input DNA rep2 description:raw sequence 070929_5
23 GSM301565 HEK Input DNA rep3 12,814,371 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:Input DNA title:HEK Input DNA rep3 description:raw sequence 070929_6
24 GSM301566 HEK ChIP DNA rep1 12,814,371 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:Polymerase II ChIP DNA title:HEK ChIP DNA rep1 description:raw sequence 070824_2
25 GSM301567 HEK ChIP DNA rep2 12,814,371 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 unclassified source_name:Polymerase II ChIP DNA title:HEK ChIP DNA rep2 description:raw sequence 070929_4
26 GSM290563 eco1-1 12,070,743 Cancer Research UK London Research Institute 2008-05-22 [GeneChip] S. cerevisiae Tiling1.0R Array SNPScanner compatible (GPL6891) genomic Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:S. cerevisiae eco1-1 title:eco1-1 description:S. cerevisiae eco1-1
27 GSM290565 eco1-1 SUPb1 12,070,743 Cancer Research UK London Research Institute 2008-05-22 [GeneChip] S. cerevisiae Tiling1.0R Array SNPScanner compatible (GPL6891) genomic Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:S. cerevisiae eco1-1 SUPb1 title:eco1-1 SUPb1 description:S. cerevisiae eco1-1 with spontaneous suppressor mutation for eco1-1 thermosensitive growth SUPb1
28 GSM290572 eco1-1 SUPb2 12,070,743 Cancer Research UK London Research Institute 2008-05-22 [GeneChip] S. cerevisiae Tiling1.0R Array SNPScanner compatible (GPL6891) genomic Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:S. cerevisiae eco1-1 SUPb2 title:eco1-1 SUPb2 description:S. cerevisiae eco1-1 with spontaneous suppressor mutation for eco1-1 thermosensitive growth SUPb1
29 GSM290573 eco1-1 SUPb3 12,070,743 Cancer Research UK London Research Institute 2008-05-22 [GeneChip] S. cerevisiae Tiling1.0R Array SNPScanner compatible (GPL6891) genomic Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:S. cerevisiae eco1-1 SUPb3 title:eco1-1 SUPb3 description:S. cerevisiae eco1-1 with spontaneous suppressor mutation for eco1-1 thermosensitive growth SUPb3
30 GSM290623 eco1-1 SUPa 12,070,743 Cancer Research UK London Research Institute 2008-05-22 [GeneChip] S. cerevisiae Tiling1.0R Array SNPScanner compatible (GPL6891) genomic Saccharomyces cerevisiae
Saccharomyces cerevisiae		 unclassified source_name:S. cerevisiae eco1-1 SUPa title:eco1-1 SUPa description:S. cerevisiae eco1-1 with spontaneous suppressor mutation for eco1-1 thermosensitive growth SUPa
31 GSM301568 HEK293T cells rep1 12,004,594 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 kidney Human embryonic kidney cells
32 GSM301581 HEK293T cells rep2 12,004,594 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 kidney Human embryonic kidney cells
33 GSM301582 B cells rep1 12,004,594 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 lymphnode Ramos lymphoma B cells
34 GSM301583 B cells rep2 12,004,594 Max Planck Institute for molecular genetics 2008-06-30 [HT Sequencing] Illumina Genome Analyzer (Homo sapiens) (GPL9052) SRA Homo sapiens
Homo sapiens		 lymphnode Ramos lymphoma B cells
35 GSM856058 Col-0 RNA-seq 11,634,971 University of California, Los Angeles 2012-01-04 [HT Sequencing] Illumina HiSeq 2000 (Arabidopsis thaliana) (GPL13222) SRA Arabidopsis thaliana
Arabidopsis thaliana		 unclassified source_name:Col-0 RNA-seq title:Col-0 RNA-seq description:mRNA-seq on poly-A purified RNA
36 GSM738727 wild-type_rosetteleaf_5week 10,403,895 Pennsylvania State University 2011-06-07 [HT Sequencing] AB SOLiD 4 System (Arabidopsis thaliana) (GPL14599) SRA Arabidopsis thaliana
Arabidopsis thaliana		 leaf rosette leaves, wild-type
37 GSM727519 TDRD1IPlong 9,924,201 Hubrecht Institute 2011-05-20 [HT Sequencing] Illumina Genome Analyzer II (Danio rerio) (GPL9319) SRA Danio rerio
Danio rerio		 testis RNA obtained from immunoprecipitation with Tdrd1 antibody from zebrafish testis extract
38 GSM336052 embryo hermaphrodites 9,306,695 Yale University 2008-10-23 [HT Sequencing] Illumina Genome Analyzer (Caenorhabditis elegans) (GPL9309) SRA Caenorhabditis elegans
Caenorhabditis elegans		 embryo Embryo_hermaphrodites
39 GSM678420 Small RNA from 4 pooled macaque principal and basal cells 9,265,352 PICB 2011-02-22 [HT Sequencing] Illumina Genome Analyzer II (Macaca mulatta) (GPL9160) SRA Macaca mulatta
Macaca mulatta		 skin macaque principal and basal cells of epididymis
40 GSM738729 hyl1-2-dcl1-20_rosetteleaf_5week 9,121,463 Pennsylvania State University 2011-06-07 [HT Sequencing] AB SOLiD 4 System (Arabidopsis thaliana) (GPL14599) SRA Arabidopsis thaliana
Arabidopsis thaliana		 leaf rosette leaves, hyl1-2/dcl1-20
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