Gene Expression Omnibus (GEO) Overview Version:2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(429)
  Primates
(23)
  Rodents
(989)
  Mammals
(19)
  Vertebrates
(0)
  Invertebrates
(12)
  Plants
(702)
  Bacteria
(7)
  Viruses
(0)
  Phages
(0)
  Unclassified
(0)
  All
(2,181)
 
  SAGE NlaIII
(3)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(765)
  Tiling Array
(31)
  cDNA Array
(1,310)
  Oligo Array
(72)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(2,181)
 
  brain
(117)
  blood
(182)
  connective
(114)
  reproductive
(20)
  muscular
(256)
  digestive
(58)
  liver
(146)
  lung
(61)
  urinary
(45)
  endo/exo-crine
(5)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(16)
  pooled
(442)
  unclassified
(719)
  all
(2,181)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
41 GSM7493 WT, Gal batch, 20 min, LiCl 9,335 Technical University of Denmark 2003-06-19 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:Total RNA from aerobic cultivation on galactose with LiCl title:WT, Gal batch, 20 min, LiCl description:Wild type strain CEN.PK113-7D from an aerobic batch cultivation with a start concentration of 20 g/L galactose. This sample was taken 20 minutes after addition of LiCl to a concentration of 10 mM.
42 GSM7494 WT, Gal batch, 40 min, LiCl 9,335 Technical University of Denmark 2003-06-19 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:Total RNA from aerobic cultivation on galactose with LiCl title:WT, Gal batch, 40 min, LiCl description:Wild type strain CEN.PK113-7D from an aerobic batch cultivation with a start concentration of 20 g/L galactose. This sample was taken 40 minutes after addition of LiCl to a concentration of 10 mM.
43 GSM7495 WT, Gal batch, 60 min, LiCl 9,335 Technical University of Denmark 2003-06-19 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:Total RNA from aerobic cultivation on galactose with LiCl title:WT, Gal batch, 60 min, LiCl description:Wild type strain CEN.PK113-7D from an aerobic batch cultivation with a start concentration of 20 g/L galactose. This sample was taken 60 minutes after addition of LiCl to a concentration of 10 mM.
44 GSM7496 WT, Gal batch, 140 min, LiCl 9,335 Technical University of Denmark 2003-06-19 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:Total RNA from aerobic cultivation on galactose with LiCl title:WT, Gal batch, 140 min, LiCl description:Wild type strain CEN.PK113-7D from an aerobic batch cultivation with a start concentration of 20 g/L galactose. This sample was taken 140 minutes after addition of LiCl to a concentration of 10 mM.
45 GSM6219 sgs (6-C-20211) 8,363 MIT 2003-05-06 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:sgs (6-C-20211) title:sgs (6-C-20211) description:Yeast aging study. sgs1 null yeast grown without treatment to log phase.
46 GSM6220 sgs rep (5) C-20229 8,363 MIT 2003-05-06 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:sgs rep (5) C-20229 title:sgs rep (5) C-20229 description:Yeast aging study. sgs1 null yeast grown without treatment to log phase.
47 GSM6221 sgs + mms (6-C-20212) 8,363 MIT 2003-05-06 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:sgs + mms (6-C-20212) title:sgs + mms (6-C-20212) description:Yeast aging study. sgs1 null yeast grown under DNA damaging (with MMS) conditions to log phase.
48 GSM6222 sgs mms rep (7) C-20230 8,363 MIT 2003-05-06 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:sgs mms rep (7) C-20230 title:sgs mms rep (7) C-20230 description:Yeast aging study. sgs1 null yeast grown under DNA damaging (with MMS) conditions to log phase.
49 GSM6223 wt (2-20156) 8,363 MIT 2003-05-06 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:wt (2-20156) title:wt (2-20156) description:Yeast aging study. Wild type yeast grown without treatment to log phase.
50 GSM6224 wt rep (1)C-20239 8,363 MIT 2003-05-06 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:wt rep (1)C-20239 title:wt rep (1)C-20239 description:Yeast aging study. Wild type yeast grown without treatment to log phase.
51 GSM6225 wt + mms (4-C-20157) 8,363 MIT 2003-05-06 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:wt + mms (4-C-20157) title:wt + mms (4-C-20157) description:Yeast aging study. Wild type yeast grown under DNA damaging (with MMS) conditions to log phase.
52 GSM6226 wt mms rep (3) C-20228 8,363 MIT 2003-05-06 [GeneChip] [YG_S98] Affymetrix Yeast Genome S98 Array (GPL90) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:wt mms rep (3) C-20228 title:wt mms rep (3) C-20228 description:Yeast aging study. Wild type yeast grown under DNA damaging (with MMS) conditions to log phase.
53 GSM6024 DBY8778(wt)_stationary_phase_0hours 6,111 Stanford University 2003-04-15 [cDNA Array] Segal_3 (GPL289) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:DBY8778(wt)_stationary_phase_0hours reference title:DBY8778(wt)_stationary_phase_0hours description:Wild type and ypl230w mutant under stationary phase. DBY8778(wt)_stationary_phase_0hours
54 GSM6025 delUSV1_stationary_phase_7hours 6,111 Stanford University 2003-04-15 [cDNA Array] Segal_3 (GPL289) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:delUSV1_stationary_phase_7hours reference title:delUSV1_stationary_phase_7hours description:Wild type and ypl230w mutant under stationary phase. delUSV1_stationary_phase_7hours
55 GSM6026 delUSV1_stationary_phase_9hours 6,111 Stanford University 2003-04-15 [cDNA Array] Segal_3 (GPL289) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:delUSV1_stationary_phase_9hours reference title:delUSV1_stationary_phase_9hours description:Wild type and ypl230w mutant under stationary phase. delUSV1_stationary_phase_9hours
56 GSM6027 delUSV1_stationary_phase_1day 6,111 Stanford University 2003-04-15 [cDNA Array] Segal_3 (GPL289) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:delUSV1_stationary_phase_1day reference title:delUSV1_stationary_phase_1day description:Wild type and ypl230w mutant under stationary phase. delUSV1_stationary_phase_1day
57 GSM6028 DBY8778(wt)_stationary_phase_3hours 6,111 Stanford University 2003-04-15 [cDNA Array] Segal_3 (GPL289) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:DBY8778(wt)_stationary_phase_3hours reference title:DBY8778(wt)_stationary_phase_3hours description:Wild type and ypl230w mutant under stationary phase. DBY8778(wt)_stationary_phase_3hours
58 GSM6029 DBY8778(wt)_stationary_phase_5hours 6,111 Stanford University 2003-04-15 [cDNA Array] Segal_3 (GPL289) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:DBY8778(wt)_stationary_phase_5hours reference title:DBY8778(wt)_stationary_phase_5hours description:Wild type and ypl230w mutant under stationary phase. DBY8778(wt)_stationary_phase_5hours
59 GSM6030 DBY8778(wt)_stationary_phase_7hours 6,111 Stanford University 2003-04-15 [cDNA Array] Segal_3 (GPL289) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:DBY8778(wt)_stationary_phase_7hours reference title:DBY8778(wt)_stationary_phase_7hours description:Wild type and ypl230w mutant under stationary phase. DBY8778(wt)_stationary_phase_7hours
60 GSM6031 DBY8778(wt)_stationary_phase_9hours 6,111 Stanford University 2003-04-15 [cDNA Array] Segal_3 (GPL289) RNA Saccharomyces cerevisiae
Saccharomyces cerevisiae
unclassified source_name:DBY8778(wt)_stationary_phase_9hours reference title:DBY8778(wt)_stationary_phase_9hours description:Wild type and ypl230w mutant under stationary phase. DBY8778(wt)_stationary_phase_9hours
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