Gene Expression Omnibus (GEO) Overview Version:2014-04-12Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data Unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(103)
  Primates
(0)
  Rodents
(0)
  Mammals
(0)
  Vertebrates
(0)
  Invertebrates
(0)
  Plants
(60)
  Bacteria
(0)
  Viruses
(0)
  Phages
(0)
  Unclassified
(12)
  All
(175)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  Tiling Array
(0)
  cDNA Array
(174)
  Oligo Array
(1)
  Bead Array
(0)
  Protein Array
(0)
  Antibody
(0)
  RT-PCR
(0)
  HT-Seq
(0)
  Other
(0)
  All
(175)
 
  brain
(0)
  blood
(0)
  connective
(28)
  reproductive
(0)
  muscular
(0)
  digestive
(0)
  liver
(0)
  lung
(0)
  urinary
(0)
  endo/exo-crine
(74)
  embryo
(0)
  adult aerial structure
(0)
  young aerial structure
(0)
  root
(0)
  meristem/growing tissue
(0)
  flower/sexual organ
(0)
  seed/fruit/grain
(0)
  pooled
(0)
  unclassified
(72)
  all
(174)
 
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Sample ID Title Number of Data Institute Submission date Platform Sample type Species Organ class Reasoning of the classification
Keywords used for the classification are shown with bold font.
61 GSM110515 Sugarcane transcriptome - ch2: Drought_24h_Exp_1; ch1: control_24h_1 (R) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum sp.,unidentified
Saccharum sp.,unidentified
unclassified source_name:Drought_24h_control_1 Drought_24h_Exp_1 title:Sugarcane transcriptome - ch2: Drought_24h_Exp_1; ch1: control_24h_1 (R) description:Plants under drought conditions (24h) x control plants, experiment 1
62 GSM110516 Sugarcane transcriptome - ch1: Drought_24h_Exp_2; ch2: control_24h_2 (L) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum sp.,unidentified
Saccharum sp.,unidentified
unclassified source_name:Drought_24h_Exp_2 Drought_24h_control_2 title:Sugarcane transcriptome - ch1: Drought_24h_Exp_2; ch2: control_24h_2 (L) description:Plants under drought conditions (24h) x control plants, experiment 2
63 GSM110517 Sugarcane transcriptome - ch1: Drought_24h_Exp_2; ch2: control_24h_2 (R) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum sp.,unidentified
Saccharum sp.,unidentified
unclassified source_name:Drought_24h_Exp_2 Drought_24h_control_2 title:Sugarcane transcriptome - ch1: Drought_24h_Exp_2; ch2: control_24h_2 (R) description:Plants under drought conditions (24h) x control plants, experiment 2
64 GSM110518 Sugarcane transcriptome - ch2: Drought_72h_Exp_1; ch1: control_72h_1 (L) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum sp.,unidentified
Saccharum sp.,unidentified
unclassified source_name:Drought_72h_control_1 Drought_72h_Exp_1 title:Sugarcane transcriptome - ch2: Drought_72h_Exp_1; ch1: control_72h_1 (L) description:Plants under drought conditions (72h) x control plants, experiment 1
65 GSM110519 Sugarcane transcriptome - ch2: Drought_72h_Exp_1; ch1: control_72h_1 (R) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum sp.,unidentified
Saccharum sp.,unidentified
unclassified source_name:Drought_72h_control_1 Drought_72h_Exp_1 title:Sugarcane transcriptome - ch2: Drought_72h_Exp_1; ch1: control_72h_1 (R) description:Plants under drought conditions (72h) x control plants, experiment 1
66 GSM110520 Sugarcane transcriptome - ch1: Drought_72h_Exp_2; ch2: control_72h_2 (L) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum sp.,unidentified
Saccharum sp.,unidentified
unclassified source_name:Drought_72h_Exp_2 Drought_72h_control_2 title:Sugarcane transcriptome - ch1: Drought_72h_Exp_2; ch2: control_72h_2 (L) description:Plants under drought conditions (72h) x control plants, experiment 2
67 GSM110521 Sugarcane transcriptome - ch1: Drought_72h_Exp_2; ch2: control_72h_2 (R) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum sp.,unidentified
Saccharum sp.,unidentified
unclassified source_name:Drought_72h_Exp_2 Drought_72h_control_2 title:Sugarcane transcriptome - ch1: Drought_72h_Exp_2; ch2: control_72h_2 (R) description:Plants under drought conditions (72h) x control plants, experiment 2
68 GSM110522 Sugarcane transcriptome - ch2: Drought_120h_Exp_1; ch1: control_120h_1 (L) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum sp.,unidentified
Saccharum sp.,unidentified
unclassified source_name:Drought_120h_control_1 Drought_120h_Exp_1 title:Sugarcane transcriptome - ch2: Drought_120h_Exp_1; ch1: control_120h_1 (L) description:Plants under drought conditions (120h) x control plants, experiment 1
69 GSM110523 Sugarcane transcriptome - ch2: Drought_120h_Exp_1; ch1: control_120h_1 (R) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum sp.,unidentified
Saccharum sp.,unidentified
unclassified source_name:Drought_120h_control_1 Drought_120h_Exp_1 title:Sugarcane transcriptome - ch2: Drought_120h_Exp_1; ch1: control_120h_1 (R) description:Plants under drought conditions (120h) x control plants, experiment 1
70 GSM110524 Sugarcane transcriptome - ch1: Drought_120h_Exp_2; ch2: control_120h_2 (L) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum sp.,unidentified
Saccharum sp.,unidentified
unclassified source_name:Drought_120h_Exp_2 Drought_120h_control_2 title:Sugarcane transcriptome - ch1: Drought_120h_Exp_2; ch2: control_120h_2 (L) description:Plants under drought conditions (120h) x control plants, experiment 2
71 GSM110525 Sugarcane transcriptome - ch1: Drought_120h_Exp_2; ch2: control_120h_2 (R) 4,608 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum sp.,unidentified
Saccharum sp.,unidentified
unclassified source_name:Drought_120h_Exp_2 Drought_120h_control_2 title:Sugarcane transcriptome - ch1: Drought_120h_Exp_2; ch2: control_120h_2 (R) description:Plants under drought conditions (120h) x control plants, experiment 2
72 GSM110500 Sugarcane transcriptome - ch1: MeJA treatment_6h_exp_2; ch2: MeJA_control_2 (L) 4,607 Universidade de São Paulo - USP 2006-05-24 [cDNA Array] SUCAST Sugarcane 2208 v1.0 (GPL3799) RNA Saccharum hybrid cultivar SP80-3280
Saccharum hybrid cultivar SP80-3280
unclassified source_name:MeJA_6h_2 MeJA_control_2 title:Sugarcane transcriptome - ch1: MeJA treatment_6h_exp_2; ch2: MeJA_control_2 (L) description:Treatment with methyljasmonate; 0h x 6h (experiment 2)
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