Gene Expression Omnibus (GEO) Overview Version：2013-06-15Japanese page
An overview of the GEO entries broken down by the measurement platforms and the features of the measured samples.
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Data unit : [ DataSet / Sample / Platform ] Show explanation>> <<Hide explanation
DataSet : Series(GSE) x Platform(GPL). A set of related gene expression data.
Sample : Biological materials.
platform : Methods or instruments used for the gene expression profilings.
The numbers shown in the tabs are the numbers of the data (series, samples or platforms) belonging to the groups.
  Human
(18,625)		   Primates
(206)		   Rodents
(12,612)		   Mammals
(782)		   Vertebrates
(1,156)		   Invertebrates
(4,045)		   Plants
(6,642)		   Bacteria
(2,980)		   Viruses
(50)		   Phages
(4)		   Unclassified
(287)		   All
(47,440)		  
  SAGE NlaIII
(224)		   SAGE RsaI
(1)		   SAGE Sau3A
(16)		   MPSS
(56)		   GeneChip
(17,192)		   Tiling Array
(3,579)		   cDNA Array
(5,850)		   Oligo Array
(12,094)		   Bead Array
(3,016)		   Protein Array
(1)		   Antibody
(39)		   RT-PCR
(246)		   HT-Seq
(4,931)		   Other
(183)		   All
(47,440)		  
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Title Platform Institute Submission date Species Data size
(probes x samples)		 Sample NCBI
FTP
site
Animal Plant  
brain blood connective reproductive muscular digestive liver lung urinary endo/exo-crine embryo adult aerial structure young aerial structure root meristem/growing tissue flower/sexual organ seed/fruit/grain pooled unclassified
41 IL-10-conditioned dendritic cells elicit innate inflammatory gene products in response to danger signals (GSE1316) [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) University of Oxford 2004-04-14 Mus musculus
Mus musculus		 4,955,152
(2,477,576 x 2) 		1 1 by_platform
by_series
42 SAGE Libraries from Highly Purified Mouse Hematopoietic Stem Cells from the E14.5 Fetal Liver and Adult Bone Marrow (GSE13243) [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) Canada's Michael Smith Genome Sciences Centre 2008-10-16 Mus musculus
Mus musculus		 4,955,152
(2,477,576 x 2) 		1 1 by_platform
by_series
43 Undifferentiated and differentiated mammosphere SAGE libraries (GSE3841) [SAGE NlaIII] SAGE:17:NlaIII:Mus musculus (GPL1349) Ontario Genomics Innovation Centre (OGIC) 2005-12-15 Mus musculus
Mus musculus		 4,955,152
(2,477,576 x 2) 		2 by_platform
by_series
44 Comparative SAGE Analysis of the Response to Hypoxia in Human Pulmonary and Aortic Endothelial Cells (GSE2838) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) University of Pittsburgh 2005-06-25 Homo sapiens
Homo sapiens		 4,808,706
(801,451 x 6) 		6 by_platform
by_series
45 Normal Oral Transcriptome (GSE8127) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) BC Cancer Research Centre 2007-06-14 Homo sapiens
Homo sapiens		 4,808,706
(801,451 x 6) 		6 by_platform
by_series
46 Profiling of spatio-temporally regulated transcripts during cerebral corticogenesis in the mouse (GSE15031) [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) Universiti Putra Malaysia 2009-02-26 Mus musculus
Mus musculus		 4,737,192
(789,532 x 6) 		6 by_platform
by_series
47 Mouse T helper cell clones (GSE205) [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) University of Oxford 2003-01-15 Mus musculus
Mus musculus		 4,737,192
(789,532 x 6) 		4 2 by_platform
by_series
48 Sexually dimorphic gene expression in the hypothalamus, pituitary gland and cortex by SAGE (GSE2156) [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) Penn State College of Medicine 2005-01-14 Mus musculus
Mus musculus		 4,737,192
(789,532 x 6) 		4 2 by_platform
by_series
49 SAGE profiles from cultured keratinocytes and human epidermis (GSE31) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) Nijmegen Centre for Molecular Life Sciences, Radboud University Nijmegen Medical Center Nijmegen 2002-02-14 Homo sapiens
Homo sapiens		 4,007,255
(801,451 x 5) 		5 by_platform
by_series
50 SAGE Hiroshima gastric cancer tissue (GSE545) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) Hiroshima University Graduate School of Biomedical Sciences 2003-07-21 Homo sapiens
Homo sapiens		 4,007,255
(801,451 x 5) 		5 by_platform
by_series
51 Mild exercise training favorably modulates gene expression in human skeletal muscle (GSE5792) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) Penn State College of Medicine 2006-09-07 Homo sapiens
Homo sapiens		 4,007,255
(801,451 x 5) 		5 by_platform
by_series
52 Mouse cerebellum (GSE1090) [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) The Ohio State Universiy 2004-03-02 Mus musculus
Mus musculus		 3,947,660
(789,532 x 5) 		5 by_platform
by_series
53 SAGE libraries from mouse (GSE25749) [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) National Institute on Aging, NIH 2010-12-01 Mus musculus
Mus musculus		 3,947,660
(789,532 x 5) 		2 2 1 by_platform
by_series
54 Regulation of hypothalamic gene expression by glucocorticoid: implications for energy homeostasis (GSE3366) [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) Penn State College of Medicine 2005-09-26 Mus musculus
Mus musculus		 3,947,660
(789,532 x 5) 		5 by_platform
by_series
55 Mouse Atlas of Gene Expression Project (GSE4726) [SAGE NlaIII] SAGE:10:NlaIII:Mus musculus (GPL11) Canada's Michael Smith Genome Sciences Centre 2006-04-26 Mus musculus
Mus musculus		 3,947,660
(789,532 x 5) 		1 1 1 2 by_platform
by_series
56 eye-SAGE (GSE10) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) Massachusetts Eye and Ear 2001-10-03 Homo sapiens
Homo sapiens		 3,205,804
(801,451 x 4) 		4 by_platform
by_series
57 human peripheral nervous system SAGE (GSE2529) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) Academic Medical Center 2005-04-15 Homo sapiens
Homo sapiens		 3,205,804
(801,451 x 4) 		4 by_platform
by_series
58 Effects of estrogen (GSE41) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) M.D. Anderson Cancer Center 2002-05-20 Homo sapiens
Homo sapiens		 3,205,804
(801,451 x 4) 		4 by_platform
by_series
59 A SAGE approach to discovery of apolipoprotein E4 allele-specific genes involved in increased risk in Alzheimer disease (GSE6677) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) Duke 2007-01-08 Homo sapiens
Homo sapiens		 3,205,804
(801,451 x 4) 		4 by_platform
by_series
60 Effect of TERT and ATM on Gene Expression Profiles in Human Fibroblasts (GSE953) [SAGE NlaIII] SAGE:10:NlaIII:Homo sapiens (GPL4) British Columbia Cancer Agency 2004-01-13 Homo sapiens
Homo sapiens		 3,205,804
(801,451 x 4) 		4 by_platform
by_series
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