遺伝子発現バンク(GEO)目次バージョン:2014-04-12English page
NCBI Gene Expression Omnibus (GEO) に登録されているデータを、測定技術と材料の属性に基づいて整理しました。

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データ単位 : [ データセット / サンプル / プラットフォーム ] 単位の説明>> <<説明を隠す
データセット  : 研究・目的ごとにまとめられた発現データの集合 (発現データマトリクス)
サンプル  : 測定に附された生体試料
プラットフォーム : 発現定量のための測定プロトコル
各タブ内に表示される数値は、そのタブ分類に属するデータ数です。
  ヒト
(22,139)
  霊長
(288)
  齧歯
(15,364)
  哺乳
(970)
  脊椎
(1,364)
  無脊椎
(4,819)
  植物
(7,611)
  バクテリア
(3,409)
  ウィルス
(59)
  ファージ
(8)
  未分類
(433)
  すべて
(56,529)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(0)
  タイリングアレイ
(0)
  cDNAアレイ
(0)
  オリゴアレイ
(0)
  ビーズアレイ
(0)
  タンパク質アレイ
(0)
  抗体アレイ
(0)
  RT-PCR
(5)
  HT-Seq
(0)
  その他
(21)
  すべて
(3,409)
 
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タイトル プラットフォーム 登録機関 登録日 生物種 データサイズ
(プローブ数×サンプル数)
測定サンプル NCBI
FTP
サイト
動物 植物  
結合 生殖 消化 分泌 胎児 地上構造 若い地上構造 成長点 花・生殖 種子・果実 混合 分類不能
1 The Condition-Dependent Transcriptional Landscape of Burkholderia pseudomallei (GSE43205) [タイリングアレイ] NimbleGen Burkholderia pseudomallei K96243 385K tiling array [071211_BPK96243_CO_Tiling] (GPL16432) Genome Institute of Singapore 2012-12-30 類鼻疽菌(Burkholderia pseudomallei)
Burkholderia pseudomallei
129,249,924
(389,307×332)
24 1 307 by_platform
by_series
2 Genomic Acquisition of Virulence Factors in Natural Isolates of Burkholderia (GSE18766) [オリゴアレイ] 081118_Sims_GIS_multi_Burkh_cgh (GPL9490) GENOME INSTITUTE OF SINGAPORE 2009-10-27 Burkholderia thailandensis
Burkholderia thailandensis
17,937,136
(366,064×49)
49 by_platform
by_series
3 Analysis of the Haloferax volcanii Transcriptome (GSE18066) [GeneChip] Haloferax volcanii DS2 tiled array (GPL9170) The Ohio State Uinversity 2009-09-10 Haloferax volcanii
Haloferax volcanii
15,836,576
(259,616×61)
1 60 by_platform
by_series
4 CGH analysis of 39 Lactococcus lactis strains. (GSE12638) [タイリングアレイ] Lactococcus lactis pangenome 385K short oligo array (GPL7231) CMBI 2008-09-02 Lactococcus lactis subsp. cremoris
Lactococcus lactis subsp. cremoris
15,189,681
(389,479×39)
39 by_platform
by_series
5 Halobacterium salinarum NRC-1 growth curve, tiling arrays (GSE12923) [タイリングアレイ] Halobacterium tiling array Agilent 015962 (GPL7255) Institute for Systems Biology 2008-09-24 Halobacterium sp. NRC-1
Halobacterium sp. NRC-1
12,905,712
(243,504×53)
53 by_platform
by_series
6 Prevalence of transcription promoters within archaeal operons and coding sequences (GSE13150) [タイリングアレイ] Halobacterium tiling array Agilent 015962 (GPL7255) Institute for Systems Biology 2008-10-10 Halobacterium sp. NRC-1
Halobacterium sp. NRC-1
12,905,712
(243,504×53)
53 by_platform
by_series
7 Mapping the DNA-binding response regulators of Desulfovibrio vulgaris Hildenborough (GSE25163) [タイリングアレイ] NimbleGen Desulfovibrio vulgaris 385k array (GPL11167) Lawrence Berkeley Lab 2010-11-05 Desulfovibrio vulgaris
Desulfovibrio vulgaris
12,480,380
(367,070×34)
34 by_platform
by_series
8 Comparative genomic hybridization study of Streptococcus pneumoniae (GSE29501) [オリゴアレイ] Agilent-031422 S_pneumoniae_CGH (GPL13281) J Craig Venter Institute 2011-05-24 Streptococcus pneumoniae,Streptococcus pneumoniae TIGR4
Streptococcus pneumoniae,Streptococcus pneumoniae TIGR4
11,531,100
(45,220×255)
255 by_platform
by_series
9 Comparative genomic hybridization study of Neisseria meningitidis (GSE30813) [オリゴアレイ] Agilent-032741 Neisseria_CGH (GPL13375) J Craig Venter Institute 2011-07-20 髄膜炎菌(Neisseria meningitidis)
Neisseria meningitidis
11,305,000
(45,220×250)
250 by_platform
by_series
10 Genome-scale Analysis of E. coli FNR Reveals Complex Features of Transcription Factor Binding (GSE41195) [タイリングアレイ] UW-Madison Escherichia coli K-12 MG1655 tiling array (YD Design) (GPL8708) University of Wisconsin - Madison 2012-09-27 Escherichia coli str. K-12 substr. MG1655
Escherichia coli str. K-12 substr. MG1655
10,968,902
(378,238×29)
29 by_platform
by_series
11 Transcript map of Shewanella oneidensis MR-1 (GSE45217) [タイリングアレイ] Custom NimbleGen Shewanella oneidensis MR-1 Tiling v2 [NimbleGen_MR1_2005K_1] (GPL16797) University of California 2013-03-15 Shewanella oneidensis MR-1
Shewanella oneidensis MR-1
10,118,180
(2,023,636×5)
5 by_platform
by_series
12 Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome (GeneChip) (GSE48532) [GeneChip] [SynComm1a520717] SynComm1: Synthetic Human Gut Community GeneChip, v1.0 (GPL9803) Washington University School of Medicine 2013-07-03 Bacteroides thetaiotaomicron VPI-5482
Bacteroides thetaiotaomicron VPI-5482
10,051,944
(59,833×168)
168 by_platform
by_series
13 Effects of Diet on Resource Utilization by a Model Human Gut Microbiota Containing Bacteroides cellulosilyticus WH2, a Symbiont with an Extensive Glycobiome (GSE48537) [GeneChip] [SynComm1a520717] SynComm1: Synthetic Human Gut Community GeneChip, v1.0 (GPL9803) Washington University School of Medicine 2013-07-03 Bacteroides thetaiotaomicron VPI-5482
Bacteroides thetaiotaomicron VPI-5482
10,051,944
(59,833×168)
168 by_platform
by_series
14 Analysis of Geobacter sulfurreducens under multiple growth conditions (GSE22512) [タイリングアレイ] UCSD Nimblegen Geobacter sulfurreducens 381K Tiling Array 2007 (Probe) (GPL9112) UCSD 2010-06-22 Geobacter sulfurreducens PCA
Geobacter sulfurreducens PCA
9,910,524
(381,174×26)
26 by_platform
by_series
15 Rho and NusG suppress pervasive antisense transcription in Escherichia coli (GSE41940) [タイリングアレイ] UW-Madison Escherichia coli K-12 MG1655 tiling array (YD Design) (GPL8708) UW-Madison 2012-10-31 Escherichia coli K-12
Escherichia coli K-12
9,834,188
(378,238×26)
26 by_platform
by_series
16 Novel gene discovery in up to 10 ETEC strains and production of species microarray. Discovery of conserved and unique ETEC genes by comparative genome hybridization studies. (GSE25601) [オリゴアレイ] Agilent-029784 ETEC_CGH (GPL10979) J Craig Venter Institute 2010-11-24 大腸菌(Escherichia coli)
Escherichia coli
9,767,520
(45,220×216)
216 by_platform
by_series
17 Chip-chip from Escherichia coli MG1655 K-12, WT and ∆fnr strains (GSE41186) [タイリングアレイ] UW-Madison Escherichia coli K-12 MG1655 tiling array (YD Design) (GPL8708) University of Wisconsin - Madison 2012-09-27 Escherichia coli str. K-12 substr. MG1655
Escherichia coli str. K-12 substr. MG1655
9,455,950
(378,238×25)
25 by_platform
by_series
18 Mutation Mapping of 31 Streptococcus suis strains (GSE26052) [オリゴアレイ] ICDC Streptococcus suis GZ1 tilling arrays (MAP01, MAP02) (GPL11315) China CDC 2010-12-14 ブタ連鎖球菌(Streptococcus suis)
Streptococcus suis
9,023,852
(291,092×31)
31 by_platform
by_series
19 ChIP-chip of Geobacter sulfurreducens PCA with antibody against RNAP and RpoD under various conditions (GSE22503) [タイリングアレイ] UCSD Nimblegen Geobacter sulfurreducens 381K Tiling Array 2007 (Probe) (GPL9112) UCSD 2010-06-22 Geobacter sulfurreducens PCA
Geobacter sulfurreducens PCA
8,004,654
(381,174×21)
21 by_platform
by_series
20 Strand-specific transcriptome profiling with directly labeled RNA on genomic tiling microarrays (GSE25876) [タイリングアレイ] Porphyromonas gingivalis W83 genomic tiling array mapped format (GPL11291) The Forsyth Institute 2010-12-06 歯周病原性菌(Porphyromonas gingivalis)
Porphyromonas gingivalis
7,376,526
(409,807×18)
12 6 by_platform
by_series
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