| 1 |
GPL10008 |
Oxford Gene Technology Chip2 Salmonella typhimurium microarray SL1344 strain product code: 010021 |
43,452 |
McMaster University |
2010-02-04 |
Oxford Gene Technologies (OGT) |
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
 |
オリゴアレイ |
in situ oligonucleotide, Oxford Gene Technology Chip2 Salmonella typhimurium microarray SL1344 strain product code: 010021, |
| 2 |
GPL10017 |
WUSTL Yersinia pestis 15K array |
15,360 |
Iowa State University |
2010-02-05 |
Genome Sequencing Center, Washington University School of Medicine |
ペスト菌(Yersinia pestis)
 |
オリゴアレイ |
spotted oligonucleotide, WUSTL Yersinia pestis 15K array, |
| 3 |
GPL10020 |
Roseburia inulinivorans 5K array |
4,992 |
University of Aberdeen |
2010-02-08 |
Rowett Institute of Nutrition and Health |
Roseburia inulinivorans
 |
cDNAアレイ |
spotted DNA/cDNA, Roseburia inulinivorans 5K array, The array has been printed in 48 blocks (4 columns and 12 rows), each block contains 324 features; 18 columns with 6 rows in triplicate at 0.20mm spacing. Mixed Arabidopsis thaliana cDNAs have been printed as landmarks in the top left corners of blocks 1,1; 1,4; 4,1; 4,4; 5,1; 5,4; 8,1; 8,4; 9,1; 9,4; 12,1 and 12,4. |
| 4 |
GPL10023 |
"Dehalococcoides ethenogenes" strain 195 with Mixed Community Sequences |
15,744 |
Cornell University |
2010-02-10 |
Agilent |
Dehalococcoides ethenogenes 195
 |
オリゴアレイ |
in situ oligonucleotide, "Dehalococcoides ethenogenes" strain 195 with Mixed Community Sequences, "Dehalococcoides ethenogenes" strain 195 with additional community members and luciferase. Arrays of this design have barcodes that begin with 16023019 or 2523019. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions. |
| 5 |
GPL10038 |
Neisseria meningitidis MC58 hfq- mutant examination array |
37,425 |
Boston University |
2010-02-11 |
NimbleGen |
Neisseria meningitidis MC58
 |
オリゴアレイ |
in situ oligonucleotide, Neisseria meningitidis MC58 hfq- mutant examination array, DNA microarrays were designed by Nimblegen Inc. (Nimblegen, Madison, WI) using the N. meningitidis MC58 genome as a reference (Genbank, accession # NC_003112) (Tettelin et al., 2000). Arrays were designed using the Nimblegen 4-plexTM format consisting of four arrays on each individual chip. Each array contained 72,000 probes, for a total of 385,000 probes per chip. For interrogation of each target open reading frame, ten unique corresponding 60-mer synthetic DNA oligonucleotide probes were synthesized directly onto Nimblegen 4-plexTM arrays, and each probe was printed in duplicate. 100% of identified open reading frames were represented on the arrays. Intergenic probes were also printed on each array in duplicate. An additional set of 859 random sequence oligonucleotide probes were designed and included on the arrays to estimate non-specific binding. The design (.ndf) file and description (.ngd) file are available as Supplementary files (at the foot of this record). The .ndf file contains oligo probe sequence information. NCBI Reference Sequence: NC_003112.2 |
| 6 |
GPL10040 |
Chr. Hansen A/S_Bifidobacterium animalis subsp lactis BB12_1689_v1.0 |
1,689 |
Chr. Hansen A/S |
2010-02-12 |
Chr. Hansen A/S |
Bifidobacterium animalis subsp. lactis
 |
オリゴアレイ |
spotted oligonucleotide, Chr. Hansen A/S_Bifidobacterium animalis subsp lactis BB12_1689_v1.0, |
| 7 |
GPL10041 |
D Steinhauser E.coli 4.4K Agilent Array |
4,400 |
Max Planck Institute |
2010-02-12 |
ImaGene, Agilent |
Escherichia coli str. K-12 substr. MG1655
 |
オリゴアレイ |
in situ oligonucleotide, D Steinhauser E.coli 4.4K Agilent Array, |
| 8 |
GPL10046 |
Nimblegen Escherichia coli K12 (071112_Ecoli_K12) |
76,813 |
Science Apps, L3C |
2010-02-14 |
NimbleGen |
Escherichia coli str. K-12 substr. MG1655
|
オリゴアレイ |
in situ oligonucleotide, Nimblegen Escherichia coli K12 (071112_Ecoli_K12), |
| 9 |
GPL10053 |
Mycobacterium smegmatis version 4 |
6,897 |
University of Otago |
2010-02-16 |
Pathogen Functional Genomics Resource Center |
Mycobacterium smegmatis str. MC2 155
 |
オリゴアレイ |
in situ oligonucleotide, Mycobacterium smegmatis version 4, 70mer Oligonucleotide, Aminosilane, 3x replicate oligo printings |
| 10 |
GPL10058 |
Agilent-019314 UW_Lidstrom_2008 Methylobacterium extorquens AM1 11k array |
10,689 |
University of Washington |
2010-02-17 |
Agilent Technologies |
Methylobacterium extorquens AM1
 |
オリゴアレイ |
in situ oligonucleotide, Agilent-019314 UW_Lidstrom_2008 Methylobacterium extorquens AM1 11k array, Methylobacterium extorquens strain AM1 Platform annotation based on June 2002 annotation (genome sequencing done by Integrated Genomics, http://www.integratedgenomics.com/genomereleases.html). |
| 11 |
GPL10060 |
Deinococcus Radiodurans R1_Microarray V1.0 |
3,126 |
Korea atomic energy research institute |
2010-02-17 |
E-Biogen Inc. |
Deinococcus radiodurans R1
 |
cDNAアレイ |
spotted DNA/cDNA, Deinococcus Radiodurans R1_Microarray V1.0, |
| 12 |
GPL10072 |
AGRF Leptospira interrogans spotted oligo array |
16,896 |
Monash University |
2010-02-19 |
The Australian Genomics Research Facility |
Leptospira interrogans
 |
オリゴアレイ |
spotted oligonucleotide, AGRF Leptospira interrogans spotted oligo array, |
| 13 |
GPL10081 |
CCG-UNAM Rhizobium etli CFN42 6051 v1.0 |
12,672 |
Universidad Nacional Autonoma de México |
2010-02-20 |
MWG-UNAM |
Rhizobium etli CFN 42
 |
オリゴアレイ |
spotted oligonucleotide, CCG-UNAM Rhizobium etli CFN42 6051 v1.0, Whole genome expression microarray for Rhizobium etli CFN42, representing the all open reading frames (ORF) of the chromosome and all 6 plasmids (NC_007761, NC007762, NC_007763, NC_007764, NC_004041, NC_007765, NC_007766), included repeat regions, 70mers, Ctrl probes replicated 8 times, negative control probes replicated 16 times. |
| 14 |
GPL10089 |
NimbleGen E. faecalis v583 6.2K A7980-00-01 |
6,228 |
Universidad de Chile |
2010-02-22 |
NimbleGen |
Enterococcus faecalis V583
 |
オリゴアレイ |
in situ oligonucleotide, NimbleGen E. faecalis v583 6.2K A7980-00-01, Catalog design for Enterococcus faecalis V583 (Taxonomy Id: 226185) (genome plus 3 plasmids. (NC_004668, NC_004669, NC_004670, NC_004671 - downloaded 6/5/2008). Aimed to select 11 probes/target, N=33599 probes from 3114 targets, 125 targets have no probes, 26 targets are exemplars - probes are on the array 2 times. Deatails in www.nimblegen.com. |
| 15 |
GPL10091 |
Agilent-020923 ICEclcB13 |
1,120 |
University of Lausanne |
2010-02-22 |
Agilent Technologies |
Pseudomonas knackmussii
 |
オリゴアレイ |
in situ oligonucleotide, Agilent-020923 ICEclcB13, clc element of strain B13 Arrays of this design have barcodes that begin with 16020923 or 2520923. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions. |
| 16 |
GPL10095 |
Agilent Potato bacteria scabturg 15K array |
15,744 |
University of Helsinki |
2010-02-23 |
Agilent |
Streptomyces scabiei,Streptomyces turgidiscabies
 |
オリゴアレイ |
in situ oligonucleotide, Agilent Potato bacteria scabturg 15K array, |
| 17 |
GPL10101 |
Custom Febit Shewanella oneidensis MR-1 13.5K biochip |
13,536 |
Saarland University |
2010-02-24 |
febit biomed gmbh |
Shewanella oneidensis MR-1
 |
オリゴアレイ |
in situ oligonucleotide, Custom Febit Shewanella oneidensis MR-1 13.5K biochip, |
| 18 |
GPL10130 |
Bifidobacterium breve 210B array |
2,196 |
University of Verona |
2010-03-04 |
University of Verona - Scientific and Technological Department - Plant Functional Genomics Centre |
Bifidobacterium breve
 |
オリゴアレイ |
in situ oligonucleotide, Bifidobacterium breve 210B array, A total of 2110 probes, representing all the identified ORFs of B. breve 210B genome, of 35-40 bp in length were designed using OligoArray 2.1 software. Oligos were synthesized in 18 replicates on a 2x40k CombiMatrix array (CombiMatrix, Mulkiteo, USA). Replicates were distributed on the chip at random, non-adjacent positions. A set of 29 negative control probes designed on phage and plant sequences were also included on the chip in 60 replicates at randomly distributed positions. Spots size: 25 microns Total number of spots: 94928 The Platform data table reflects a condensed representation of the array's replicate features. The full array layout (gal file) representing all of the individual features is linked as a supplementary file at the foot of this record. |
| 19 |
GPL10140 |
Shanghai Biochip Staph epidermidis 116 cDNA array |
116 |
Fudan university |
2010-03-05 |
Shanghai Biochip Co., Ltd |
表皮ブドウ球菌(Staphylococcus epidermidis)
 |
cDNAアレイ |
spotted DNA/cDNA, Shanghai Biochip Staph epidermidis 116 cDNA array, |
| 20 |
GPL10141 |
Shanghai Biochip Staph epidermidis 48 oligo array |
48 |
Fudan university |
2010-03-05 |
Shanghai Biochip Co., Ltd |
表皮ブドウ球菌(Staphylococcus epidermidis)
|
オリゴアレイ |
spotted oligonucleotide, Shanghai Biochip Staph epidermidis 48 oligo array, |