遺伝子発現バンク(GEO)目次バージョン：2013-04-06English page

NCBI Gene Expression Omnibus (GEO) に登録されているデータを、測定技術と材料の属性に基づいて整理しました。

ヒト (3,705)   霊長 (37)   齧歯 (1,748)   哺乳 (295)   脊椎 (402)   無脊椎 (1,004)   植物 (2,170)   バクテリア (1,636)   ウィルス (78)   ファージ (8)   未分類 (399)   すべて (11,528)

SAGE NlaIII (0)   SAGE RsaI (0)   SAGE Sau3A (0)   MPSS (0)   GeneChip (87)   タイリングアレイ (49)   cDNAアレイ (284)   オリゴアレイ (1,073)   ビーズアレイ (0)   タンパク質アレイ (0)   抗体アレイ (0)   RT-PCR (3)   HT-Seq (129)   その他 (11)   すべて (1,636)   1   |   2   |   3   |   4   |   5      »      [82] プラットフォームID タイトル プローブ数 登録機関 登録日 製作元 生物種 測定技術分類 分類の根拠 黒字の強調部分が測定技術分類時に用いたキーワードになります。 1 GPL9990 Agilent Burkholderia cenocepacia 11K 10,724 Harvard Medical School 2010-01-29 Agilent Burkholderia cenocepacia オリゴアレイ spotted oligonucleotide, Agilent Burkholderia cenocepacia 11K, 2 GPL9985 Vibrio salmonicida 5.5K V1.0.1 AROS 5,473 University of Tromsø 2010-01-28 Operon Biotechnologies Aliivibrio salmonicida オリゴアレイ spotted oligonucleotide, Vibrio salmonicida 5.5K V1.0.1 AROS, 3 GPL9981 UofT KB1 19.2K v2 19,200 University of toronto 2010-01-26 University Health Network (UHN) Microarray Facility, Toronto, Ontario, www.microarrays.ca dechlorinating enrichment culture KB-1 cDNAアレイ spotted DNA/cDNA, UofT KB1 19.2K v2, KB1 mixed microbial consortium. Composition of community as estimated by 16S qPCR: Dehalococcoides:48.1-70.2% Chlorobi SJA-28:6-14.9% Acetobacterium:2.65-12% Sporomusa:1.2-11.45% Spirochaete SA-8 :2.8-8.3% Methanomicrobiales:3.5-5.8% OP5:2.5-5% Geobacter:3-4.4% Methanosarcina:0.1-1% Methanosaeta:0-0% Bacteroidales 1:0-0.8% Syntrophus:0-0.03% Syntrophobacter:0-0.2% Sulfurospirillum:0-0.002% Methanomethylvorans:0-0.04% 4 GPL9953 TMHRI M28 GAS array 1,765 National Medicines Institute 2010-01-21 Affymetrix Streptococcus pyogenes MGAS6180 GeneChip in situ oligonucleotide, TMHRI M28 GAS array, 5 GPL9949 University of Groningen Bacillus cereus ATCC 14579 5k array (condensed) 5,167 university of Groningen 2010-01-20 University of Groningen Bacillus cereus ATCC 14579 cDNAアレイ spotted DNA/cDNA, University of Groningen Bacillus cereus ATCC 14579 5k array (condensed), The Platform data table reflects a condensed representation of the array's replicate features. 6 GPL9941 Operon E. coli Custom 3.8K 55156017 array 3,782 Universitaet Wuerzburg 2010-01-15 Operon Biotechnologies, Inc. 大腸菌(Escherichia coli) オリゴアレイ spotted oligonucleotide, Operon E. coli Custom 3.8K 55156017 array, Complete genomes of six Escherichia coli strains (6 genomes and four plasmids). The number of open reading frames (ORFs) or genes represented is as follows: 4269 ORFs of non-pathogenic E. coli K-12strain MG1655, 5306 ORFs of enterohemorrhagic E. coli O157:H7 strain EDL933, 5251 ORFs of enterohemorrhagic E. coli O157:H7 strain Sakai, 5366 ORFs of uropathogenic E. coli strain CFT073, 322 ORFs of uropathogenic E. coli strain 536, 448 ORFs of uropathogenic E. coli strain UTI89, 3 genes of EHEC plasmid OSAK1, 10 genes of EHEC plasmid pO157_Sakai, 97 genes of EHEC plasmid pO157_EDL933 and genes of UPEC plasmid pUTI89. In addition, the array comprises also a number of positive and negative controls. 7 GPL9905 JCVI PFGRC Listeria monocytogenes 21K vt3a array designed primarily based on strain HCC23 6,827 J. Craig Venter Institute 2010-01-13 JCVI PFGRC 病原性リステリア菌(Listeria monocytogenes) オリゴアレイ spotted oligonucleotide, JCVI PFGRC Listeria monocytogenes 21K vt3a array designed primarily based on strain HCC23, This set includes 6346 oligonucleotides, has 21168 spots distributed in 48 blocks. 8 GPL9904 JCVI PFGRC Listeria monocytogenes 21K vt3a array designed primarily based on strain 4b F2365 6,827 J. Craig Venter Institute 2010-01-13 JCVI PFGRC 病原性リステリア菌(Listeria monocytogenes) オリゴアレイ spotted oligonucleotide, JCVI PFGRC Listeria monocytogenes 21K vt3a array designed primarily based on strain 4b F2365, This set includes 6346 oligonucleotides, has 21168 spots distributed in 48 blocks. 9 GPL9901 SMD Print_745 Mycobacterium tuberculosis 4,608 Centro de Investigación y Asistencia en Tecnología y diseño del Estado de Jalisco, A.C. 2010-01-11 Stanford Functional Genomics Facility, Stanford School of Medicine 結核菌(Mycobacterium tuberculosis) cDNAアレイ spotted DNA/cDNA, SMD Print_745 Mycobacterium tuberculosis, 10 GPL9900 SMD Print_1259 Mycobacterium tuberculosis 4,992 Centro de Investigación y Asistencia en Tecnología y diseño del Estado de Jalisco, A.C. 2010-01-11 Stanford Functional Genomics Facility, Stanford School of Medicine 結核菌(Mycobacterium tuberculosis) cDNAアレイ spotted DNA/cDNA, SMD Print_1259 Mycobacterium tuberculosis, 11 GPL9887 R. conorii chip V2 1,973 Urmite 2010-01-11 Agilent Rickettsia conorii str. Malish 7 オリゴアレイ in situ oligonucleotide, R. conorii chip V2, 12 GPL9864 JCVI PFGRC Salmonella typhimurium version 5 25,392 University of Arkansas 2010-01-08 J. Craig Venter Institute Salmonella enterica subsp. enterica serovar Typhimurium オリゴアレイ spotted oligonucleotide, JCVI PFGRC Salmonella typhimurium version 5, Number of Grids: 48 Element Type: 70mer Oligonucleotide Oligonucleotides Designed: 5462 Replicate Oligo Printings: 4x Salmonella typhimurium/typhi version 5 13 GPL9860 FZ_IBT1_Cglutamicum_10K_ver2 10,944 Forschungszentrum Jülich GmbH 2010-01-07 Operon (Cologne, Germany) Corynebacterium glutamicum ATCC 13032 オリゴアレイ spotted oligonucleotide, FZ_IBT1_Cglutamicum_10K_ver2, C. glutamicum ATCC 13032, based on the genome sequence entry NC_006959 14 GPL9855 Custom Agilent Escherichia coli 4 x 44k Gene Expression Array 42,291 Baylor College of Medicine 2010-01-05 Agilent Escherichia coli str. K-12 substr. MG1655 オリゴアレイ in situ oligonucleotide, Custom Agilent Escherichia coli 4 x 44k Gene Expression Array, 15 GPL984 ISB Halobacterium ORF microarray 04743-4772 10,752 Institute for Systems Biology 2004-02-11 Halobacterium sp. NRC-1 オリゴアレイ spotted oligonucleotide, ISB Halobacterium ORF microarray 04743-4772, Layout of the ISB's spotted-oligonucleotide microarray, for ISB Halobacterium arrays 04743-4772. Keywords = Halo Keywords = ISB Keywords = Institute for Systems Biology Keywords = Halobacterium 16 GPL983 ISB Halobacterium ORF microarray 04678-04707 10,752 Institute for Systems Biology 2004-02-11 Halobacterium sp. NRC-1 オリゴアレイ spotted oligonucleotide, ISB Halobacterium ORF microarray 04678-04707, Layout of the ISB's spotted-oligonucleotide microarray, for ISB Halobacterium arrays 04678-04707 Keywords = Halo Keywords = ISB Keywords = Institute for Systems Biology Keywords = Halobacterium 17 GPL9823 Genotypic Custom Designed M. smegmatis Gene Expression 15K Profiling Microarray 15,207 Bionivid Technology [P] Ltd 2009-12-23 Agilent Mycobacterium smegmatis str. MC2 155 オリゴアレイ in situ oligonucleotide, Genotypic Custom Designed M. smegmatis Gene Expression 15K Profiling Microarray, 18 GPL982 ISB Halobacterium ORF microarray 10,752 Institute for Systems Biology 2004-02-11 Halobacterium sp. NRC-1 オリゴアレイ spotted oligonucleotide, ISB Halobacterium ORF microarray, Layout of the ISB's spotted-oligonucleotide microarray, for ISB Halobacterium arrays 3883-3910. Keywords = Halo Keywords = ISB Keywords = Institute for Systems Biology Keywords = Halobacterium 19 GPL9817 TNO/NimbleGen 60-mer 071112 Bacillus subtilis subsp. subtilis strain 168 4x72K array 8,208 TNO 2009-12-18 NimbleGen Bacillus subtilis subsp. subtilis str. 168 オリゴアレイ in situ oligonucleotide, TNO/NimbleGen 60-mer 071112 Bacillus subtilis subsp. subtilis strain 168 4x72K array, NimbleGen design name 071112_Bsub_168_EXP_X4 (each slide contains 4x72,000 probes). A gene expression design for 4,104 genes from B.subtilis subsp. subtilis strain 168 NC_000964 with eight probe pairs (PM/MM) per gene. Each probe is replicated 2 times. The design includes control probes. Native array description files (ndf, ngd) are linked below as supplementary files. Multiple different probe sequences per gene. Probe sequences available in ndf file. 20 GPL9806 NimbleGen_Ppu_pSL1_5.3k array v1.0 5,346 National Institute for Agro-Environmental Sciences 2009-12-16 NimbleGen Pseudomonas putida KT2440 オリゴアレイ in situ oligonucleotide, NimbleGen_Ppu_pSL1_5.3k array v1.0, NimbleGen design name 2007-08-09_GFC234_Pput_60mer_expr, NimbleGen design ID 6223. Sample species Pseudomonas putida KT2440. The Platform data table reflects a condensed representation of the expression array's replicate (SEQ_ID) features. The .ndf and .ngd files are linked below as supplementary files. 1   |   2   |   3   |   4   |   5      »      [82]