遺伝子発現バンク(GEO)目次バージョン:2014-04-12English page
NCBI Gene Expression Omnibus (GEO) に登録されているデータを、測定技術と材料の属性に基づいて整理しました。

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RSS
データ単位 : [ データセット / サンプル / プラットフォーム ] 単位の説明>> <<説明を隠す
データセット  : 研究・目的ごとにまとめられた発現データの集合 (発現データマトリクス)
サンプル  : 測定に附された生体試料
プラットフォーム : 発現定量のための測定プロトコル
各タブ内に表示される数値は、そのタブ分類に属するデータ数です。
  ヒト
(615,734)
  霊長
(5,814)
  齧歯
(225,055)
  哺乳
(20,968)
  脊椎
(22,581)
  無脊椎
(46,584)
  植物
(107,706)
  バクテリア
(45,091)
  ウィルス
(1,432)
  ファージ
(112)
  未分類
(6,986)
  すべて
(1,101,311)
 
  SAGE NlaIII
(92)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(366)
  GeneChip
(31,260)
  タイリングアレイ
(5,692)
  cDNAアレイ
(24,724)
  オリゴアレイ
(35,607)
  ビーズアレイ
(2,290)
  タンパク質アレイ
(0)
  抗体アレイ
(0)
  RT-PCR
(6)
  HT-Seq
(7,427)
  その他
(120)
  すべて
(107,706)
 
 
(0)
 
(0)
  結合
(0)
  生殖
(0)
 
(0)
  消化
(0)
 
(0)
 
(0)
 
(0)
  分泌
(0)
  胎児
(0)
  地上構造
(15,762)
  若い地上構造
(0)
 
(5,765)
  成長点
(2,624)
  花・生殖
(3,659)
  種子・果実
(3,775)
  混合
(0)
  分類不能
(0)
  すべて
(107,706)
 
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サンプルID タイトル データ数 登録機関 登録日 プラットフォーム サンプルタイプ 生物種 臓器分類 分類の根拠
黒字の強調部分が臓器分類時に用いたキーワードになります。
1 GSM618276 RNA-seq seed 6,953,940 Yellow Sea Fisheries Research Institute (YSFRI), Chinese Academy of Fishery Sciences, Qingdao, 266071, China 2010-11-05 [HT-Seq] Illumina Genome Analyzer (Carthamus tinctorius) (GPL11168) SRA ベニバナ(Carthamus tinctorius)
Carthamus tinctorius
種子・果実 seed
2 GSM455230 Orange_MT_170DAF 3,416,419 Cornell University 2009-09-22 [HT-Seq] Illumina Genome Analyzer (Citrus sinensis) (GPL9256) SRA スイートオレンジ(Citrus sinensis)
Citrus sinensis
種子・果実 fruits
3 GSM712521 Small RNAs from Capsicum annuum fruit 3,339,704 University of Delaware 2011-04-20 [HT-Seq] Illumina Genome Analyzer II (Capsicum annuum) (GPL13435) SRA トウガラシ(Capsicum annuum)
Capsicum annuum
種子・果実 Fruits
4 GSM455228 Orange_WT_170DAF 2,787,921 Cornell University 2009-09-22 [HT-Seq] Illumina Genome Analyzer (Citrus sinensis) (GPL9256) SRA スイートオレンジ(Citrus sinensis)
Citrus sinensis
種子・果実 fruits
5 GSM803581 Small RNAs from Solanum lycopersicum fruit 2,221,143 University of Delaware 2011-09-29 [HT-Seq] Illumina Genome Analyzer II (Solanum lycopersicum) (GPL10518) SRA トマト(Solanum lycopersicum)
Solanum lycopersicum
種子・果実 Fruit
6 GSM452717 sRNA from tomato mature green fruit 2,093,422 University of East Anglia 2009-09-15 [HT-Seq] Illumina Genome Analyzer (Solanum lycopersicum) (GPL9245) SRA トマト(Solanum lycopersicum)
Solanum lycopersicum
種子・果実 mature green fruit
7 GSM452716 sRNA from tomato fruit 11mm to 14mm in diameter 1,549,707 University of East Anglia 2009-09-15 [HT-Seq] Illumina Genome Analyzer (Solanum lycopersicum) (GPL9245) SRA トマト(Solanum lycopersicum)
Solanum lycopersicum
種子・果実 11-14mm fruit
8 GSM769285 Glycine max Dev.Seed 1,548,211 University of Delaware 2011-07-29 [HT-Seq] Illumina Genome Analyzer II (Glycine max) (GPL11192) SRA ダイズ(Glycine max)
Glycine max
種子・果実 Dev.Seed
9 GSM622040 2X2_seed_DAP6_small_RNA_seq 1,432,901 The University of Texas at Austin 2010-11-11 [HT-Seq] Illumina Genome Analyzer II (Arabidopsis thaliana) (GPL9302) SRA シロイヌナズナ(Arabidopsis thaliana)
Arabidopsis thaliana
種子・果実 2X2_seed_DAP6_small_RNA_seq
10 GSM553690 degradome library from Solanum lycopersicum green fruit 1,422,649 University of East Anglia 2010-06-08 [HT-Seq] Illumina Genome Analyzer II (Solanum lycopersicum) (GPL10518) SRA トマト(Solanum lycopersicum)
Solanum lycopersicum
種子・果実 green fruit 10-15mm
11 GSM452719 sRNA from tomato fruit 3 days post breaker 1,420,351 University of East Anglia 2009-09-15 [HT-Seq] Illumina Genome Analyzer (Solanum lycopersicum) (GPL9245) SRA トマト(Solanum lycopersicum)
Solanum lycopersicum
種子・果実 breaker +3 days fruit
12 GSM945637 B73_emb 1,400,988 University of Minnesota 2012-06-07 [オリゴアレイ] NimbleGen 2.1M Maize Methylation Array (GPL13499) genomic トウモロコシ(Zea mays)
Zea mays
胎児・胚 B73, embryo, input B73, embryo, IP
13 GSM945638 Mo17_emb 1,400,988 University of Minnesota 2012-06-07 [オリゴアレイ] NimbleGen 2.1M Maize Methylation Array (GPL13499) genomic トウモロコシ(Zea mays)
Zea mays
胎児・胚 Mo17, embryo, input Mo17, embryo, IP
14 GSM945639 B73_endo 1,400,988 University of Minnesota 2012-06-07 [オリゴアレイ] NimbleGen 2.1M Maize Methylation Array (GPL13499) genomic トウモロコシ(Zea mays)
Zea mays
種子・果実 B73, endosperm, input B73, endosperm, IP
15 GSM945640 Mo17_endo 1,400,988 University of Minnesota 2012-06-07 [オリゴアレイ] NimbleGen 2.1M Maize Methylation Array (GPL13499) genomic トウモロコシ(Zea mays)
Zea mays
種子・果実 Mo17, endosperm, input Mo17, endosperm, IP
16 GSM969532 B73_k27_embryo 1,400,988 University of Minnesota 2012-07-18 [オリゴアレイ] NimbleGen 3x1.4M Maize Methylation Array (GPL15621) genomic トウモロコシ(Zea mays)
Zea mays
胎児・胚 B73 embryo r1 IP B73 embryo input
17 GSM969534 B73_k27_seed 1,400,988 University of Minnesota 2012-07-18 [オリゴアレイ] NimbleGen 2.1M Maize Methylation Array (GPL13499) genomic トウモロコシ(Zea mays)
Zea mays
種子・果実 B73 seed r1 input B73 seed IP
18 GSM969543 Mo17_k27_seed 1,400,988 University of Minnesota 2012-07-18 [オリゴアレイ] NimbleGen 3x1.4M Maize Methylation Array (GPL15621) genomic トウモロコシ(Zea mays)
Zea mays
種子・果実 Mo17 seed IP Mo17 seed input
19 GSM622043 4X2_seed_DAP6_small_RNA_seq 1,267,399 The University of Texas at Austin 2010-11-11 [HT-Seq] Illumina Genome Analyzer II (Arabidopsis thaliana) (GPL9302) SRA シロイヌナズナ(Arabidopsis thaliana)
Arabidopsis thaliana
種子・果実 4X2_seed_DAP6_small_RNA_seq
20 GSM452714 sRNA from tomato fruit 1mm to 3mm in diameter 1,254,562 University of East Anglia 2009-09-15 [HT-Seq] Illumina Genome Analyzer (Solanum lycopersicum) (GPL9245) SRA トマト(Solanum lycopersicum)
Solanum lycopersicum
種子・果実 1-3mm fruit
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