遺伝子発現バンク(GEO)目次バージョン:2013-04-06English page
NCBI Gene Expression Omnibus (GEO) に登録されているデータを、測定技術と材料の属性に基づいて整理しました。
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データ単位 : [ データセット / サンプル / プラットフォーム ] 単位の説明>> <<説明を隠す
データセット  : 研究・目的ごとにまとめられた発現データの集合 (発現データマトリクス)
サンプル  : 測定に附された生体試料
プラットフォーム : 発現定量のための測定プロトコル
各タブ内に表示される数値は、そのタブ分類に属するデータ数です。
  ヒト
(3,705)
  霊長
(37)
  齧歯
(1,748)
  哺乳
(295)
  脊椎
(402)
  無脊椎
(1,004)
  植物
(2,170)
  バクテリア
(1,636)
  ウィルス
(78)
  ファージ
(8)
  未分類
(399)
  すべて
(11,528)
 
  SAGE NlaIII
(6)
  SAGE RsaI
(1)
  SAGE Sau3A
(2)
  MPSS
(4)
  GeneChip
(133)
  タイリングアレイ
(141)
  cDNAアレイ
(403)
  オリゴアレイ
(857)
  ビーズアレイ
(57)
  タンパク質アレイ
(0)
  抗体アレイ
(2)
  RT-PCR
(50)
  HT-Seq
(79)
  その他
(13)
  すべて
(1,748)
 
プラットフォームID タイトル プローブ数 登録機関 登録日 製作元 生物種 測定技術分類 分類の根拠
黒字の強調部分が測定技術分類時に用いたキーワードになります。
1 GPL5449 CSMA [DpnII: Mus musculus] signature list 103,515 Solexa 2007-06-28 ハツカネズミ(Mus musculus)
Mus musculus
その他 other, CSMA [DpnII: Mus musculus] signature list, Contains annotation and mapping information for canonical signatures Unigene Mm.151 and mouse genome sequence (mm7) were used for the annotation
2 GPL3862 piRNA sequences in mouse 65,535 Brandeis University 2006-06-09 Massachusetts General Hospital ハツカネズミ(Mus musculus)
Mus musculus
その他 other, piRNA sequences in mouse, Sequences were analyzed and annotated for matches to the mouse genome. See Supplemental Online Materials from Lau et al. Science. 2006 Jun 15; [Epub ahead of print] PMID: 16778019 for detailed protocol on data processing.
3 GPL3858 piRNA sequences in rat 61,293 Brandeis University 2006-06-08 Massachusetts General Hospital ドブネズミ(Rattus norvegicus)
Rattus norvegicus
その他 other, piRNA sequences in rat, Sequences were analyzed and annotated for matches to the rat genome. See Supplemental Online Materials from Lau et al. Science. 2006 Jun 15; [Epub ahead of print] PMID: 16778019 for detailed protocol on data processing.
4 GPL5955 MaPTOL for REST 49,833 The Scripps Research Institute 2007-10-02 Scripps Research Institute ハツカネズミ(Mus musculus)
Mus musculus
その他 other, MaPTOL for REST,
5 GPL9191 DUMRU Mouse 12K v1.0 6,963 Deakin University 2009-09-14 Deakin University, Metabolic Research Unit ハツカネズミ(Mus musculus)
Mus musculus
その他 other, DUMRU Mouse 12K v1.0, ONLY CLONES OF INTEREST HAVE BEEN SEQUENCED AND IDENTIFIED
6 GPL4477 lung_development_Nmyc_mouse 3,979 Hospital for Sick Children 2006-10-23 ハツカネズミ(Mus musculus)
Mus musculus
その他 MS, lung_development_Nmyc_mouse, Virtual platform describing the full complement of proteins identified in the study of lung development from E13.5 to adult. Also included are proteins identifed in E18.5 Nmyc9a hypomorphic lungs. The data set was generated by MudPIT mass spectrometry analysis of embryonic lungs at E13.5, E16.5 and E18.5 and postnatal days P2, P14 and Adult (>8 weeks). The lungs were fractionated into nuclear, cytosol and mitochondria enriched fractions by sucrose gradient centrifugation. The extracted proteins were digested with trypsin and analyzed by MudPIT.
7 GPL2771 Proteins in mitochondrial, chromatin, and soluble fractions of Myc-induced apoptosis in Rat1 fibroblasts 1,053 UTHSCSA 2005-08-22 ドブネズミ(Rattus norvegicus)
Rattus norvegicus
その他 MS, Proteins in mitochondrial, chromatin, and soluble fractions of Myc-induced apoptosis in Rat1 fibroblasts, Proteins identified in mitochondrial, chromatin, and soluble fractions of Rat1_Myc and Rat1_vector cells 12 hours after serum deprivation which induces apoptosis.
8 GPL15089 NanoString nCounter mouse miRNA expression platform 599 National Institutes of Health 2012-01-04 NanoString Technologies ハツカネズミ(Mus musculus)
Mus musculus
その他 other, NanoString nCounter mouse miRNA expression platform, Assay includes probes for the following: 578 mouse miRNAs, 33 viral miRNAs, 6 positive miRNA assay controls, 8 negative miRNA assay controls, 4 mRNA housekeeping controls, and 3 non-mammalian miRNA spike-in probes. Based on miRBase v.15
9 GPL15295 Rat miRNA nCounter Expression Assay Kit 426 Imperial College London 2012-03-02 Nanostring technologies (Seattle) ドブネズミ(Rattus norvegicus)
Rattus norvegicus
その他 other, Rat miRNA nCounter Expression Assay Kit, specific miRNA taggig in solution prior to biotin-streptavidin mediated hybridization to surface
10 GPL13406 TaqMan Array Mouse Stem Cell Pluripotency Card 96 NCBI/NLM/NIH 2011-04-13 Applied Biosystems ハツカネズミ(Mus musculus)
Mus musculus
その他 other, TaqMan Array Mouse Stem Cell Pluripotency Card, The TaqMan® Mouse Stem Cell Pluripotency Array is an efficient, easy-to-use micro fluidic card for the characterization of undifferentiated stem cells or their differentiated derivatives. This gene signature panel contains mouse orthologs of well-defined human markers for pluripotency plus 6 endogenous controls. The format of the TaqMan Array allows for 1-4 replicates to be run in parallel per array.
11 GPL8165 Mus musculus spotted antigen array 69 UC San Diego School of Medicine 2009-02-06 Whatman FAST slides, proteins spotted in Silverman Lab, UCSD School of Medicine ハツカネズミ(Mus musculus)
Mus musculus
その他 spotted peptide or protein, Mus musculus spotted antigen array,
12 GPL10454 Mouse metabolomics mass spec data 0 The University of British Columbia 2010-05-21 Not applicable. ハツカネズミ(Mus musculus)
Mus musculus
その他 MS, Mouse metabolomics mass spec data,
13 GPL7497 Virtual Platform for Peptidome Submissions 0 2008-10-16 not applicable ハツカネズミ(Mus musculus)
Mus musculus
その他 other, Virtual Platform for Peptidome Submissions, ESI-QUAD-TOF ESI-ION-TRAP ESI-FTICR-CID ESI-FTICR-ECD MALDI-QUAD-TOF MALDI-TOF-TOF MALDI-TOF-PSD ESI-4SECTOR ESI-QUAD FTMS-ECD ETD-TRAP MALDI-QUAD-TOF MALDI-QIT-TOF ETD+W TRAP-FTMS