遺伝子発現バンク(GEO)目次バージョン:2013-04-06English page
NCBI Gene Expression Omnibus (GEO) に登録されているデータを、測定技術と材料の属性に基づいて整理しました。

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データ単位 : [ データセット / サンプル / プラットフォーム ] 単位の説明>> <<説明を隠す
データセット  : 研究・目的ごとにまとめられた発現データの集合 (発現データマトリクス)
サンプル  : 測定に附された生体試料
プラットフォーム : 発現定量のための測定プロトコル
各タブ内に表示される数値は、そのタブ分類に属するデータ数です。
  ヒト
(3,705)
  霊長
(37)
  齧歯
(1,748)
  哺乳
(295)
  脊椎
(402)
  無脊椎
(1,004)
  植物
(2,170)
  バクテリア
(1,636)
  ウィルス
(78)
  ファージ
(8)
  未分類
(399)
  すべて
(11,528)
 
  SAGE NlaIII
(6)
  SAGE RsaI
(1)
  SAGE Sau3A
(2)
  MPSS
(4)
  GeneChip
(0)
  タイリングアレイ
(0)
  cDNAアレイ
(0)
  オリゴアレイ
(0)
  ビーズアレイ
(57)
  タンパク質アレイ
(0)
  抗体アレイ
(2)
  RT-PCR
(50)
  HT-Seq
(0)
  その他
(13)
  すべて
(1,748)
 
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プラットフォームID タイトル プローブ数 登録機関 登録日 製作元 生物種 測定技術分類 分類の根拠
黒字の強調部分が測定技術分類時に用いたキーワードになります。
1 GPL9991 Hubrecht Rat 2.1M HX1 2,142,096 Hubrecht Institute 2010-01-29 NimbleGen ドブネズミ(Rattus norvegicus)
Rattus norvegicus
オリゴアレイ in situ oligonucleotide, Hubrecht Rat 2.1M HX1, Genome assembly: RGSC3.4 native array description file: 080616_Cuppen_rat34_WG_CGH_HX1.ndf native array description file: 080616_Cuppen_rat34_WG_CGH_HX1.pos
2 GPL9988 PGA/MGH mouse v1.1 oligonucleotide array 21,167 Dublin City University 2010-01-28 Massachusetts General Hospital Microarray Core facility ハツカネズミ(Mus musculus)
Mus musculus
オリゴアレイ spotted oligonucleotide, PGA/MGH mouse v1.1 oligonucleotide array,
3 GPL9977 Agilent-022332 Six_ChIP_03_of_03_v2 022330 974,016 Ottawa Institute of Systems Biology 2010-01-25 Agilent Technologies ハツカネズミ(Mus musculus)
Mus musculus
オリゴアレイ in situ oligonucleotide, Agilent-022332 Six_ChIP_03_of_03_v2 022330, Array #3 out of 3 for Six ChIP-on-chip. Made from ?Probes_for_3array_set_v2_sorted_Part_03? Arrays of this design have barcodes that begin with 16022332 or 2522332. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
4 GPL9976 Agilent-022329 Six_ChIP_02_of_03_v2 022328 974,016 Ottawa Institute of Systems Biology 2010-01-25 Agilent Technologies ハツカネズミ(Mus musculus)
Mus musculus
オリゴアレイ in situ oligonucleotide, Agilent-022329 Six_ChIP_02_of_03_v2 022328, Array #2 out of 3 for Six ChIP-on-chip. Made from ?Probes_for_3array_set_v2_sorted_Part_02? Arrays of this design have barcodes that begin with 16022329 or 2522329. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
5 GPL9975 Agilent-022328 Six_ChIP_01_of_03_v2 974,016 Ottawa Institute of Systems Biology 2010-01-25 Agilent Technologies ハツカネズミ(Mus musculus)
Mus musculus
オリゴアレイ in situ oligonucleotide, Agilent-022328 Six_ChIP_01_of_03_v2, Array #1 out of 3 for Six ChIP-on-chip. Made from ?Probes_for_3array_set_v2_sorted_Part_01? Arrays of this design have barcodes that begin with 16022328 or 2522328. Orientation: Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software. The ID column represents the Agilent Feature Extraction feature number. Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface). To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
6 GPL9974 Illumina mouseRef-8 v1.0a expression beadchip 24,341 Fred Hutchinson Cancer Research Center 2010-01-25 Illumina Inc. ハツカネズミ(Mus musculus)
Mus musculus
ビーズアレイ oligonucleotide beads, Illumina mouseRef-8 v1.0a expression beadchip, The Mouse-8 BeadChip can be used to study expression of over 24,000 mouse transcripts based on MEEBO, RefSeq and RIKEN FANTOM2 content. researchers can generate whole-genome expression profiles for 8 samples in parallel on a single BeadChip.
7 GPL9971 Murine 0.6K,cDNA array Version 8.0 931 Universidad do Porto 2010-01-25 EMBL Heidelberg,Genomics Core Facility ハツカネズミ(Mus musculus)
Mus musculus
cDNAアレイ spotted DNA/cDNA, Murine 0.6K,cDNA array Version 8.0,
8 GPL9967 3D-Gene Mouse miRNA Oligo chip v13.0 728 Toray Industries,Inc. 2010-01-24 TORAY Industreies, Inc. ハツカネズミ(Mus musculus)
Mus musculus
オリゴアレイ spotted oligonucleotide, 3D-Gene Mouse miRNA Oligo chip v13.0,
9 GPL9961 32K_Mouse_Genome_Array_gene list 33,696 Research centre for eco-environmental sciences, CAS 2010-01-21 CapitalBio Inc. ハツカネズミ(Mus musculus)
Mus musculus
オリゴアレイ spotted oligonucleotide, 32K_Mouse_Genome_Array_gene list,
10 GPL9943 SMD Print_1149 Mus musculus 40,704 Stanford University 2010-01-16 Stanford Functional Genomics Facility, Stanford School of Medicine ハツカネズミ(Mus musculus)
Mus musculus
cDNAアレイ spotted DNA/cDNA, SMD Print_1149 Mus musculus,
11 GPL994 MEPC3.4K 6,912 Yale University School of Medicine 2004-02-12 ハツカネズミ(Mus musculus)
Mus musculus
cDNAアレイ spotted DNA/cDNA, MEPC3.4K, Mouse Endocrine Pancreas Consortium 3.4K cDNA array. The array has 24 columns and 18 rows in each of 4 x 4 subarrays. There are two identical arrays on each slide.
12 GPL9939 Exiqon miRCURYTM LNA Arrays (V10.0) 417 Columbia University 2010-01-15 Exiqon A/S ハツカネズミ(Mus musculus)
Mus musculus
オリゴアレイ spotted oligonucleotide, Exiqon miRCURYTM LNA Arrays (V10.0),
13 GPL991 ORR4.8K 10,000 Yale University School of Medicine 2004-02-12 ドブネズミ(Rattus norvegicus)
Rattus norvegicus
オリゴアレイ spotted oligonucleotide, ORR4.8K, Rat ORR4.8K array is from a set of 4.8K Compugen 65 mer oligos. Each oligo has two replicate spots. The array has 25 col x 25 rows in each of 4 x 4 subarrays. There are two arrays on each slide.
14 GPL9906 UCSF Mouse BAC 3K array 2,896 University of California at San Francisco 2010-01-13 UCSF Cancer Research Institute ハツカネズミ(Mus musculus)
Mus musculus
cDNAアレイ spotted DNA/cDNA, UCSF Mouse BAC 3K array, The clones are ordered by position in the genome (UCSC draft genome sequence, May 2004 freeze) beginning at chromosome 1 and ending with chromosome X.
15 GPL9899 NimbleGen Mouse 2006-08-03_MM8_60mer_expr tiling design 389,307 Fred Hutchinson Cancer Research Center 2010-01-11 NimbleGen Systems Inc. ハツカネズミ(Mus musculus)
Mus musculus
タイリングアレイ in situ oligonucleotide, NimbleGen Mouse 2006-08-03_MM8_60mer_expr tiling design, Expression tiling array using NimbleGen platform. Mouse MM8 build (NCBI Build 36), 60mer probes, 9 probes/target, 42,586 gene targets.
16 GPL987 OMM13K 13,824 Yale University School of Medicine 2004-02-12 ハツカネズミ(Mus musculus)
Mus musculus
オリゴアレイ spotted oligonucleotide, OMM13K, Mouse OMM13K cDNA array is created from a set of 13K Operon 70 mer oligos. The array is in 32 pin conformation. It has 24 columns and 18 rows in each of 4 x 8 subarrays.
17 GPL986 OMM16K 16,847 Yale University School of Medicine 2004-02-12 Gene Pix ハツカネズミ(Mus musculus)
Mus musculus
cDNAアレイ spotted DNA/cDNA, OMM16K, Mouse OMM16K cDNA array is created from a set of 16K Operon 70 mer oligos. The array is in 32 pin conformation. It has 24 columns and 22 complete rows and a partial 23rd row.
18 GPL9853 Oligo GEArray, Mouse Inflammatory Cytokines & Receptors Microarray. 128 University of Illinois at Chicago 2010-01-04 SABiosciences Corporation, 6951 Executive Way, Frederick, MD 21703, USA. ハツカネズミ(Mus musculus)
Mus musculus
オリゴアレイ spotted oligonucleotide, Oligo GEArray, Mouse Inflammatory Cytokines & Receptors Microarray., An oligonucleotide array representing 113 murine inflammation-related genes (from SA Biosciences at www.sabiosciences.com, Cat. Number OMM-011.) The array is a nylon membrane based DNA microarray on which 60-mer oligonucleotides probes were printed.
19 GPL985 Operon Long Oligo, V1 32,448 U.T. Southwestern Medical Center 2004-02-11 ハツカネズミ(Mus musculus)
Mus musculus
オリゴアレイ spotted oligonucleotide, Operon Long Oligo, V1, Operon long oligo set
20 GPL9833 NimbleGen Mus musculus 2.1M 2007-09-21_MM8_Deluxe_Promoter_HX1 tiling design 2,137,504 Fred Hutchinson Cancer Research Center 2009-12-28 NimbleGen Systems Inc. ハツカネズミ(Mus musculus)
Mus musculus
タイリングアレイ in situ oligonucleotide, NimbleGen Mus musculus 2.1M 2007-09-21_MM8_Deluxe_Promoter_HX1 tiling design, Promoter tiling array using NimbleGen platform. Mouse MM8 build. Probe length 50-75bp isothermal. Tiled regions are 8200bp upstream and 3000bp downstream of 5 prime ends of genes as annotated in MM8.
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