遺伝子発現バンク(GEO)目次バージョン:2014-04-12English page
NCBI Gene Expression Omnibus (GEO) に登録されているデータを、測定技術と材料の属性に基づいて整理しました。

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データ単位 : [ データセット / サンプル / プラットフォーム ] 単位の説明>> <<説明を隠す
データセット  : 研究・目的ごとにまとめられた発現データの集合 (発現データマトリクス)
サンプル  : 測定に附された生体試料
プラットフォーム : 発現定量のための測定プロトコル
各タブ内に表示される数値は、そのタブ分類に属するデータ数です。
  ヒト
(22,139)
  霊長
(288)
  齧歯
(15,364)
  哺乳
(970)
  脊椎
(1,364)
  無脊椎
(4,819)
  植物
(7,611)
  バクテリア
(3,409)
  ウィルス
(59)
  ファージ
(8)
  未分類
(433)
  すべて
(56,529)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(23)
  タイリングアレイ
(11)
  cDNAアレイ
(71)
  オリゴアレイ
(177)
  ビーズアレイ
(0)
  タンパク質アレイ
(0)
  抗体アレイ
(0)
  RT-PCR
(0)
  HT-Seq
(122)
  その他
(0)
  すべて
(433)
 
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タイトル プラットフォーム 登録機関 登録日 生物種 データサイズ
(プローブ数×サンプル数)
測定サンプル NCBI
FTP
サイト
動物 植物  
結合 生殖 消化 分泌 胎児 地上構造 若い地上構造 成長点 花・生殖 種子・果実 混合 分類不能
1 The role of nucleosome positioning in the evolution of gene regulation (GSE21960) [HT-Seq] Illumina Genome Analyzer (Naumovia castellii) (GPL9131) MIT 2010-05-21 種名未同定(unidentified)
unidentified
1
(0×1)
1 by_platform
by_series
2 Genome-wide nucleosome position data for 12 yeast species (GSE22211) [HT-Seq] Illumina Genome Analyzer (Naumovia castellii) (GPL9131) MIT 2010-06-08 種名未同定(unidentified)
unidentified
1
(0×1)
1 by_platform
by_series
3 High-throughput sequencing reveals a simple model of nucleosome energetics (GSE23712) [HT-Seq] Illumina Genome Analyzer (Escherichia coli; Saccharomyces cerevisiae) (GPL10839) Rutgers University 2010-08-19 Escherichia coli,Saccharomyces cerevisiae
Escherichia coli,Saccharomyces cerevisiae
1
(0×1)
1 by_platform
by_series
4 Identification of Novel and Conserved MicroRNAs of Root-knot Nematode Using a Deep-sequencing Approach (GSE24833) [HT-Seq] Illumina Genome Analyzer (Capsicum annuum; Meloidogyne incognita) (GPL11112) Hunan Agricultural University 2010-10-20 Capsicum annuum,Meloidogyne incognita
Capsicum annuum,Meloidogyne incognita
1
(0×1)
1 by_platform
by_series
5 Evolutionary conservation of phototransduction and clock gene expression in the cave beetle Ptomaphagus hirtus (Coleoptera, Leiodidae) (GSE28039) [HT-Seq] Illumina Genome Analyzer II (Ptomaphagus hirtus) (GPL13297) Baylor College of Medicine 2011-03-18 Ptomaphagus,unidentified
Ptomaphagus,unidentified
1
(0×1)
1 by_platform
by_series
6 Profiling of differential allelic expression in horse, donkey, mule and hinny placental tissue (GSE30243) [HT-Seq] Illumina Genome Analyzer (Equus asinus x caballus) (GPL13775) Cornell University 2011-06-27 Equus asinus,unidentified
Equus asinus,unidentified
1
(0×1)
1 by_platform
by_series
7 Profiling of differential allelic expression in horse, donkey, mule and hinny placental tissue (GSE30243) [HT-Seq] Illumina Genome Analyzer (Equus caballus x asinus) (GPL13777) Cornell University 2011-06-27 Equus caballus,unidentified
Equus caballus,unidentified
1
(0×1)
1 by_platform
by_series
8 The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria (GSE35641) [HT-Seq] Illumina HiSeq 2000 (Escherichia coli BW25113) (GPL15206) UCSF 2012-02-08 Escherichia,unidentified
Escherichia,unidentified
1
(0×1)
1 by_platform
by_series
9 Profiling of differential allelic expression in horse, donkey, mule, and hinny placental tissues. (GSE36352) [HT-Seq] Illumina Genome Analyzer IIx (Equus caballus x asinus) (GPL15328) Cornell University 2012-03-07 Equus caballus,unidentified
Equus caballus,unidentified
1
(0×1)
1 by_platform
by_series
10 Differential epigenetic regulation in leaves and roots of sugarcane submitted to drought stress (GSE42483) [HT-Seq] Illumina Genome Analyzer IIx (Saccharum hybrid cultivar CTC6) (GPL18439) Universidade Federal do Rio de Janeiro 2012-11-23 Saccharum sp.,unidentified
Saccharum sp.,unidentified
1
(0×1)
1 by_platform
by_series
11 Differential epigenetic regulation in leaves and roots of sugarcane submitted to drought stress (GSE42483) [HT-Seq] Illumina Genome Analyzer IIx (Saccharum hybrid cultivar SP90-3414) (GPL18440) Universidade Federal do Rio de Janeiro 2012-11-23 Saccharum sp.,unidentified
Saccharum sp.,unidentified
1
(0×1)
1 by_platform
by_series
12 mRNA-Seq of whole adult females and males, and miixed sex embryos, from multiple Drosophila species (GSE43321) [HT-Seq] Illumina HiSeq 2000 (Drosophila rhopaloa) (GPL16471) NIDDK, NIH 2013-01-07 Drosophila,unidentified
Drosophila,unidentified
1
(0×1)
1 by_platform
by_series
13 Comparative Validation of the D. melanogaster Encyclopedia of DNA Elements Transcript Models (GSE44612) [HT-Seq] Illumina HiSeq 2000 (Drosophila rhopaloa) (GPL16471) NIDDK, NIH 2013-02-25 Drosophila,unidentified
Drosophila,unidentified
1
(0×1)
1 by_platform
by_series
14 Methylome of Salmonella enterica subsp. Enterica serovar Javiana str. CFSAN001992 by PacBio SMRT Sequencing (GSE45178) [HT-Seq] PacBio RS (Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992) (GPL16793) FDA/CFSAN 2013-03-14 種名未同定(unidentified)
unidentified
1
(0×1)
1 by_platform
by_series
15 Transcriptomic analysis of Alishewanella species utilizing pectin as a sole carbon source (GSE45511) [HT-Seq] Illumina Genome Analyzer IIx (Alishewanella agri) (GPL16873) Korea University 2013-03-26 Alishewanella,unidentified
Alishewanella,unidentified
1
(0×1)
1 by_platform
by_series
16 Identification of transcript starts in Desulfovibrio alaskensis G20 (GSE49484) [HT-Seq] Illumina Genome Analyzer II (Desulfovibrio alaskensis G20) (GPL17525) Lawrence Berkeley National Lab 2013-08-02 Desulfovibrio,unidentified
Desulfovibrio,unidentified
1
(0×1)
1 by_platform
by_series
17 Next Generation Metatranscriptome Sequencing of an Anaerobic Hexadecane-Degrading Microbial Consortia (GSE49830) [HT-Seq] Illumina Genome Analyzer IIx (mixed culture KAZ_0815) (GPL17563) University of California, San Diego 2013-08-13 種名未同定(unidentified)
unidentified
1
(0×1)
1 by_platform
by_series
18 Extensive divergence of transcription factor binding in Drosophila embryos with highly conserved gene expression (part 1) (GSE50766) [HT-Seq] Illumina Genome Analyzer II (Drosophila melanogaster; Drosophila pseudoobscura; Drosophila virilis) (GPL17715) UC Berkeley 2013-09-11 種名未同定(unidentified)
unidentified
1
(0×1)
1 by_platform
by_series
19 Extensive divergence of transcription factor binding in Drosophila embryos with highly conserved gene expression (part 1) (GSE50766) [HT-Seq] Illumina Genome Analyzer II (Drosophila pseudoobscura; Drosophila virilis; Drosophila yakuba) (GPL17716) UC Berkeley 2013-09-11 種名未同定(unidentified)
unidentified
1
(0×1)
1 by_platform
by_series
20 Extensive divergence of transcription factor binding in Drosophila embryos with highly conserved gene expression (GSE50773) [HT-Seq] Illumina Genome Analyzer II (Drosophila pseudoobscura; Drosophila virilis; Drosophila yakuba) (GPL17716) UC Berkeley 2013-09-11 種名未同定(unidentified)
unidentified
1
(0×1)
1 by_platform
by_series
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