遺伝子発現バンク(GEO)目次バージョン:2013-04-06English page
NCBI Gene Expression Omnibus (GEO) に登録されているデータを、測定技術と材料の属性に基づいて整理しました。
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データ単位 : [ データセット / サンプル / プラットフォーム ] 単位の説明>> <<説明を隠す
データセット  : 研究・目的ごとにまとめられた発現データの集合 (発現データマトリクス)
サンプル  : 測定に附された生体試料
プラットフォーム : 発現定量のための測定プロトコル
各タブ内に表示される数値は、そのタブ分類に属するデータ数です。
  ヒト
(17,885)
  霊長
(199)
  齧歯
(12,016)
  哺乳
(754)
  脊椎
(1,115)
  無脊椎
(3,796)
  植物
(6,479)
  バクテリア
(2,920)
  ウィルス
(51)
  ファージ
(4)
  未分類
(249)
  すべて
(45,516)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(14)
  タイリングアレイ
(7)
  cDNAアレイ
(61)
  オリゴアレイ
(104)
  ビーズアレイ
(4)
  タンパク質アレイ
(0)
  抗体アレイ
(0)
  RT-PCR
(0)
  HT-Seq
(57)
  その他
(1)
  すべて
(249)
 
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タイトル プラットフォーム 登録機関 登録日 生物種 データサイズ
(プローブ数×サンプル数)
測定サンプル NCBI
FTP
サイト
動物 植物  
結合 生殖 消化 分泌 胎児 地上構造 若い地上構造 成長点 花・生殖 種子・果実 混合 分類不能
1 The role of nucleosome positioning in the evolution of gene regulation (GSE21960) [HT-Seq] Illumina Genome Analyzer (Naumovia castellii) (GPL9131) MIT 2010-05-21 種名未同定(unidentified)
unidentified
1
(0×1)
1 by_platform
by_series
2 Genome-wide nucleosome position data for 12 yeast species (GSE22211) [HT-Seq] Illumina Genome Analyzer (Naumovia castellii) (GPL9131) MIT 2010-06-08 種名未同定(unidentified)
unidentified
1
(0×1)
1 by_platform
by_series
3 High-throughput sequencing reveals a simple model of nucleosome energetics (GSE23712) [HT-Seq] Illumina Genome Analyzer (Escherichia coli; Saccharomyces cerevisiae) (GPL10839) Rutgers University 2010-08-19 Escherichia coli,Saccharomyces cerevisiae
Escherichia coli,Saccharomyces cerevisiae
1
(0×1)
1 by_platform
by_series
4 Identification of Novel and Conserved MicroRNAs of Root-knot Nematode Using a Deep-sequencing Approach (GSE24833) [HT-Seq] Illumina Genome Analyzer (Capsicum annuum; Meloidogyne incognita) (GPL11112) Hunan Agricultural University 2010-10-20 Capsicum annuum,Meloidogyne incognita
Capsicum annuum,Meloidogyne incognita
1
(0×1)
1 by_platform
by_series
5 Evolutionary conservation of phototransduction and clock gene expression in the cave beetle Ptomaphagus hirtus (Coleoptera, Leiodidae) (GSE28039) [HT-Seq] Illumina Genome Analyzer II (Ptomaphagus hirtus) (GPL13297) Baylor College of Medicine 2011-03-18 Ptomaphagus,unidentified
Ptomaphagus,unidentified
1
(0×1)
1 by_platform
by_series
6 The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria (GSE35641) [HT-Seq] Illumina HiSeq 2000 (Escherichia coli BW25113) (GPL15206) UCSF 2012-02-08 Escherichia,unidentified
Escherichia,unidentified
1
(0×1)
1 by_platform
by_series
7 Profiling of differential allelic expression in horse, donkey, mule, and hinny placental tissues. (GSE36352) [HT-Seq] Illumina Genome Analyzer IIx (Equus caballus x asinus) (GPL15328) Cornell University 2012-03-07 Equus caballus,unidentified
Equus caballus,unidentified
1
(0×1)
1 by_platform
by_series
8 Methylome of Salmonella enterica subsp. Enterica serovar Javiana str. CFSAN001992 by PacBio SMRT Sequencing (GSE45178) [HT-Seq] PacBio RS (Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992) (GPL16793) FDA/CFSAN 2013-03-14 種名未同定(unidentified)
unidentified
1
(0×1)
1 by_platform
by_series
9 High-throughput sequencing of small RNAs from Caenorhabditis elegans (GSE5990) [HT-Seq] 454 GS (Caenorhabditis elegans; Escherichia coli) (GPL11099) Whitehead Institute for Biomedical Research and MIT 2006-10-07 Escherichia coli,Caenorhabditis elegans
Escherichia coli,Caenorhabditis elegans
1
(0×1)
1 by_platform
by_series
10 Deep sequencing of Drosophila melanogaster small RNAs (GSE11086) [HT-Seq] Illumina Genome Analyzer (Flock house virus) (GPL9402) Cold Spring Harbor Labs 2008-04-07 Drosophila melanogaster,Flock house virus
Drosophila melanogaster,Flock house virus
2
(0×2)
2 by_platform
by_series
11 Structural and Functional Analysis of Viral siRNAs using 454 sequencing (GSE17164) [HT-Seq] 454 GS (Cymbidium ringspot virus; Nicotiana benthamiana) (GPL15026) University of East Anglia 2009-07-17 Nicotiana benthamiana,Cymbidium ringspot virus
Nicotiana benthamiana,Cymbidium ringspot virus
2
(0×2)
2 by_platform
by_series
12 Structural and Functional Analysis of Viral siRNAs (GSE17278) [HT-Seq] 454 GS (Cymbidium ringspot virus; Nicotiana benthamiana) (GPL15026) University of East Anglia 2009-07-23 Nicotiana benthamiana,Cymbidium ringspot virus
Nicotiana benthamiana,Cymbidium ringspot virus
2
(0×2)
2 by_platform
by_series
13 Elucidating the stromal expression pattern in response to tumor-derived Shh (GSE18245) [HT-Seq] Illumina Genome Analyzer (Homo sapiens; Mus musculus) (GPL10329) UC Berkeley 2009-09-24 Homo sapiens,Mus musculus
Homo sapiens,Mus musculus
2
(0×2)
2 by_platform
by_series
14 De novo assembly of siRNA immunity in wild plants (GSE22079) [HT-Seq] Illumina Genome Analyzer II (Acer pseudoplatanus; Aesculus hippocastanum; Betula pendula; Fagus sylvatica; Fraxinus excelsior; Quercus robur; Tilia platyphyllos) (GPL10476) BGI-sz 2010-06-01 種名未同定(unidentified)
unidentified
2
(0×2)
2 by_platform
by_series
15 De novo assembly of siRNA immunity in wild plants (GSE22079) [HT-Seq] Illumina Genome Analyzer II (Acer pseudoplatanus; Corylus avellana; Fagus sylvatica; Tilia platyphyllos; Ulmus glabra) (GPL10477) BGI-sz 2010-06-01 種名未同定(unidentified)
unidentified
2
(0×2)
2 by_platform
by_series
16 Metatranscriptomics provides insight into the physiologies of the digestive tract symbionts within the medicinal leech, Hirudo verbana (GSE23786) [HT-Seq] Illumina Genome Analyzer (gut metagenome; Hirudo verbana) (GPL10862) University of Connectiuct 2010-08-24 Hirudo verbana,gut metagenome
Hirudo verbana,gut metagenome
2
(0×2)
2 by_platform
by_series
17 Electron acceptor-dependent identification of key anaerobic toluene degraders at a tar-oil contaminated aquifer by Pyro-SIP (GSE25449) [HT-Seq] 454 GS FLX (unidentified) (GPL11212) Helmholtz-Centre Munich 2010-11-17 種名未同定(unidentified)
unidentified
2
(0×2)
2 by_platform
by_series
18 The Genetic Basis of Rapidly Evolving Male Genital Morphology in Drosophila (GSE28663) [HT-Seq] Illumina Genome Analyzer II (Drosophila sechellia x Drosophila mauritiana) (GPL13417) University of Southern California 2011-04-15 Drosophila sechellia,unidentified
Drosophila sechellia,unidentified
2
(0×2)
2 by_platform
by_series
19 Degradome sequencing from S. castellii (GSE37723) [HT-Seq] Illumina Genome Analyzer (Naumovozyma castellii) (GPL15027) Whitehead Institute for Biomedical Research 2012-05-02 種名未同定(unidentified)
unidentified
2
(0×2)
2 by_platform
by_series
20 Structure of yeast Argonaute with guide RNA (GSE37725) [HT-Seq] Illumina Genome Analyzer (Naumovozyma castellii) (GPL15027) Whitehead Institute for Biomedical Research 2012-05-02 種名未同定(unidentified)
unidentified
2
(0×2)
2 by_platform
by_series
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