遺伝子発現バンク(GEO)目次バージョン:2013-06-15English page
NCBI Gene Expression Omnibus (GEO) に登録されているデータを、測定技術と材料の属性に基づいて整理しました。
RSS
データ単位 : [ データセット / サンプル / プラットフォーム ] 単位の説明>> <<説明を隠す
データセット  : 研究・目的ごとにまとめられた発現データの集合 (発現データマトリクス)
サンプル  : 測定に附された生体試料
プラットフォーム : 発現定量のための測定プロトコル
各タブ内に表示される数値は、そのタブ分類に属するデータ数です。
  ヒト
(3,761)
  霊長
(39)
  齧歯
(1,779)
  哺乳
(312)
  脊椎
(411)
  無脊椎
(1,032)
  植物
(2,239)
  バクテリア
(1,690)
  ウィルス
(78)
  ファージ
(8)
  未分類
(430)
  すべて
(11,831)
 
  SAGE NlaIII
(9)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(1)
  GeneChip
(10)
  タイリングアレイ
(10)
  cDNAアレイ
(79)
  オリゴアレイ
(227)
  ビーズアレイ
(0)
  タンパク質アレイ
(0)
  抗体アレイ
(0)
  RT-PCR
(2)
  HT-Seq
(71)
  その他
(1)
  すべて
(411)
 
1   |   2   |   3   |   4      »      
プラットフォームID タイトル プローブ数 登録機関 登録日 製作元 生物種 測定技術分類 分類の根拠
黒字の強調部分が測定技術分類時に用いたキーワードになります。
1 GPL6541 CSIRO-Chicken-Solexa sequencing-embryo miRNA 608,750 University of Queensland 2008-03-02 Illumina/Solexa, USA ニワトリ(Gallus gallus)
Gallus gallus
HT-Seq other, CSIRO-Chicken-Solexa sequencing-embryo miRNA,
2 GPL15124 University of Padova Anguilla anguilla 8x15K v1.0 15,449 University of Padova 2012-01-12 Agilent Technologies ヨーロッパウナギ(Anguilla anguilla)
Anguilla anguilla
HT-Seq in situ oligonucleotide, University of Padova Anguilla anguilla 8x15K v1.0, Target sequences to be included in the European eel microarray were obtained from the assembly of a total of 640,040 sequence reads obtained by 454 sequencing. The array included all annotated sequences with a blast hit to vertebrates and invertebrates but excluding bacteria, virus, plants, fungi and protozoa. For 12,296 contigs, the putative orientation was unambiguous and a single probe was designed. For 1,390 contigs, the putative orientation was ambiguous and two probes were designed. In order to minimize assembler redundancy, 163 contigs differing by less than 3 nucleotide changes were discarded. The final number of probes was 14,913. Probe design was carried out using Agilent eArray Interface which applies proprietary prediction algorithms to design 60-mer oligoprobes. Microarrays were synthesized in situ using the Agilent ink-jet technology with an 8x15K format (8 arrays in a single slide). Each array contained default positive and negative controls.
3 GPL7207 Hubrecht Institute Zebrafish Zili- and Ziwi-interacting small RNAs (454 GS FLX system) 249,524 Hubrecht Institute 2008-08-26 Hubrecht Institute ゼブラフィッシュ(Danio rerio)
Danio rerio
HT-Seq MPSS, Hubrecht Institute Zebrafish Zili- and Ziwi-interacting small RNAs (454 GS FLX system),
4 GPL10164 Illumina Genome Analyzer (Danio rerio) 0 2010-03-10 ゼブラフィッシュ(Danio rerio)
Danio rerio
HT-Seq high-throughput sequencing, Illumina Genome Analyzer (Danio rerio),
5 GPL10223 Illumina Genome Analyzer (Gallus gallus) 0 2010-03-18 ニワトリ(Gallus gallus)
Gallus gallus
HT-Seq high-throughput sequencing, Illumina Genome Analyzer (Gallus gallus),
6 GPL10241 Illumina Genome Analyzer IIx (Danio rerio) 0 2010-03-23 ゼブラフィッシュ(Danio rerio)
Danio rerio
HT-Seq high-throughput sequencing, Illumina Genome Analyzer IIx (Danio rerio),
7 GPL10398 Illumina Genome Analyzer II (Lateolabrax japonicus) 0 2010-05-06 スズキ(Lateolabrax japonicus)
Lateolabrax japonicus
HT-Seq high-throughput sequencing, Illumina Genome Analyzer II (Lateolabrax japonicus),
8 GPL10484 AB SOLiD System 2.0 (Xenopus laevis) 0 2010-06-04 アフリカツメガエル(Xenopus laevis)
Xenopus laevis
HT-Seq high-throughput sequencing, AB SOLiD System 2.0 (Xenopus laevis),
9 GPL10515 Illumina Genome Analyzer (Hypophthalmichthys nobilis) 0 2010-06-08 Hypophthalmichthys nobilis
Hypophthalmichthys nobilis
HT-Seq high-throughput sequencing, Illumina Genome Analyzer (Hypophthalmichthys nobilis),
10 GPL10516 Illumina Genome Analyzer (Hypophthalmichthys molitrix) 0 2010-06-08 ハクレン(Hypophthalmichthys molitrix)
Hypophthalmichthys molitrix
HT-Seq high-throughput sequencing, Illumina Genome Analyzer (Hypophthalmichthys molitrix),
11 GPL10658 AB SOLiD System 3.0 (Danio rerio) 0 2010-07-08 ゼブラフィッシュ(Danio rerio)
Danio rerio
HT-Seq high-throughput sequencing, AB SOLiD System 3.0 (Danio rerio),
12 GPL10692 Illumina Genome Analyzer (Anas platyrhynchos) 0 2010-07-15 マガモ(Anas platyrhynchos)
Anas platyrhynchos
HT-Seq high-throughput sequencing, Illumina Genome Analyzer (Anas platyrhynchos),
13 GPL11029 454 GS 20 (Petromyzon marinus) 0 2010-10-08 ヤツメウナギ(Petromyzon marinus)
Petromyzon marinus
HT-Seq high-throughput sequencing, 454 GS 20 (Petromyzon marinus),
14 GPL11102 454 GS (Danio rerio) 0 2010-10-22 ゼブラフィッシュ(Danio rerio)
Danio rerio
HT-Seq high-throughput sequencing, 454 GS (Danio rerio),
15 GPL11303 Illumina Genome Analyzer (Paralichthys olivaceus) 0 2010-12-10 ヒラメ(Paralichthys olivaceus)
Paralichthys olivaceus
HT-Seq high-throughput sequencing, Illumina Genome Analyzer (Paralichthys olivaceus),
16 GPL11347 Illumina Genome Analyzer II (Leucoraja erinacea) 0 2010-12-21 Leucoraja erinacea
Leucoraja erinacea
HT-Seq high-throughput sequencing, Illumina Genome Analyzer II (Leucoraja erinacea),
17 GPL11348 Illumina Genome Analyzer II (Scyliorhinus canicula) 0 2010-12-21 Scyliorhinus canicula
Scyliorhinus canicula
HT-Seq high-throughput sequencing, Illumina Genome Analyzer II (Scyliorhinus canicula),
18 GPL11349 Illumina Genome Analyzer II (Callorhinchus milii) 0 2010-12-21 ゾウギンザメ(Callorhinchus milii)
Callorhinchus milii
HT-Seq high-throughput sequencing, Illumina Genome Analyzer II (Callorhinchus milii),
19 GPL11666 Illumina Genome Analyzer (Epinephelus tauvina) 0 2011-01-27 Epinephelus tauvina
Epinephelus tauvina
HT-Seq high-throughput sequencing, Illumina Genome Analyzer (Epinephelus tauvina),
20 GPL13291 Illumina Genome Analyzer II (Labeo rohita) 0 2011-03-16 Labeo rohita
Labeo rohita
HT-Seq high-throughput sequencing, Illumina Genome Analyzer II (Labeo rohita),
1   |   2   |   3   |   4      »