| 1 |
High-throughput sequencing of small RNAs: Caenorhabditis elegans (GSE11738) |
[HT-Seq] MIT Caenorhabditis elegans small RNA sequences (Illumina/Solexa) (GPL6946) |
UCSF |
2008-06-10 |
線虫(Caenorhabditis elegans)
 |
179,289,920
(11,205,620×16)
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1 |
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15 |
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by_platform
by_series |
| 2 |
Developmental timecourse of C. elegans small RNAs with 5p monophosphates (GSE11734) |
[HT-Seq] MIT Caenorhabditis elegans small RNA sequences (Illumina/Solexa) (GPL6946) |
UCSF |
2008-06-10 |
線虫(Caenorhabditis elegans)
|
100,850,580
(11,205,620×9)
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1 |
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8 |
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by_platform
by_series |
| 3 |
Mutant analysis of C. elegans small RNAs with 5p monophosphates (GSE11735) |
[HT-Seq] MIT Caenorhabditis elegans small RNA sequences (Illumina/Solexa) (GPL6946) |
UCSF |
2008-06-10 |
線虫(Caenorhabditis elegans)
|
33,616,860
(11,205,620×3)
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3 |
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by_platform
by_series |
| 4 |
Mutant analysis of C. elegans small RNAs, 5p-end-independent (GSE11736) |
[HT-Seq] MIT Caenorhabditis elegans small RNA sequences (Illumina/Solexa) (GPL6946) |
UCSF |
2008-06-10 |
線虫(Caenorhabditis elegans)
|
22,411,240
(11,205,620×2)
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2 |
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by_platform
by_series |
| 5 |
C. elegans PRG-1 co-IP small RNAs, 5p-end-independent (GSE11737) |
[HT-Seq] MIT Caenorhabditis elegans small RNA sequences (Illumina/Solexa) (GPL6946) |
UCSF |
2008-06-10 |
線虫(Caenorhabditis elegans)
|
22,411,240
(11,205,620×2)
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2 |
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by_platform
by_series |
| 6 |
Whole genome DNAse hypersensitivity in human CD4+ T-cells (GSE8486) |
[HT-Seq] NCI Human Solexa Platform 14814K (GPL6314) |
National Cancer Institute |
2007-07-16 |
ヒト(Homo sapiens)
 |
14,814,587
(14,814,587×1)
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1 |
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by_platform
by_series |
| 7 |
High-throughput sequencing of small RNAs from Drosophila (GSE7448) |
[HT-Seq] MIT/WI Bartel D. melanogaster 454 2007 (GPL5061) |
UCSF |
2007-04-03 |
キイロショウジョウバエ(Drosophila melanogaster)
 |
7,537,970
(753,797×10)
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1 |
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4 |
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5 |
by_platform
by_series |
| 8 |
Endogenous shRNAs, siRNAs, and Other Microprocessor-independent, Dicer-dependent Small RNAs in Mouse ES Cells (GSE12521) |
[HT-Seq] Illumina small RNA sequencing (GPL7195) |
UCSF |
2008-08-21 |
ハツカネズミ(Mus musculus)
 |
6,470,970
(2,156,990×3)
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3 |
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by_platform
by_series |
| 9 |
Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome (GSE11007) |
[HT-Seq] Axtell_Arabidopsis_Degradome_v1 (Solexa/Illumina sequenced) (GPL6684) |
Pennsylvania State University |
2008-03-31 |
シロイヌナズナ(Arabidopsis thaliana)
 |
6,030,759
(2,010,253×3)
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1 |
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2 |
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by_platform
by_series |
| 10 |
A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains (GSE11014) |
[HT-Seq] CSIRO-PI Oryza Sativa small RNA sequences 2007 (Solexa sequenced) (GPL6670) |
CSIRO Plant Industry |
2008-04-01 |
イネ(Oryza sativa)
 |
5,367,312
(2,683,656×2)
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2 |
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by_platform
by_series |
| 11 |
Endogenous siRNAs derived from transposons and mRNAs in Drosophila somatic cells (GSE11019) |
[HT-Seq] Drosophila melanogaster deep-sequencing small RNAs (GPL6664) |
University of Massachusetts Medical School |
2008-04-01 |
キイロショウジョウバエ(Drosophila melanogaster)
|
3,579,380
(255,670×14)
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14 |
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by_platform
by_series |
| 12 |
Arabidopsis thaliana small RNAs sequences identified using high-throughput 454 sequencing technology (GSE6682) |
[HT-Seq] Arabidopsis thaliana small RNAs sequences identified using high-throughput 454 sequencing technology (GPL4732) |
Donald Danforth Plant Science Center |
2007-01-08 |
シロイヌナズナ(Arabidopsis thaliana)
|
3,060,050
(218,575×14)
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3 |
2 |
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8 |
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1 |
by_platform
by_series |
| 13 |
Whole genome DNAse hypersensitivity in human CD4+ T-cells (GSE8486) |
[HT-Seq] NCI Human 454 Platform 2795K (GPL6300) |
National Cancer Institute |
2007-07-16 |
ヒト(Homo sapiens)
|
2,795,975
(2,795,975×1)
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1 |
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by_platform
by_series |
| 14 |
In flies, the 5´ ends of both microRNAs and their miRNA* strands are more accurately defined than their 3´ termini (GSE9389) |
[HT-Seq] UMMS Drosophila melanogaster 454 sequenced small RNAs (GPL6024) |
University of Massachusetts Medical School |
2007-10-22 |
キイロショウジョウバエ(Drosophila melanogaster)
|
2,396,240
(59,906×40)
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20 |
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20 |
by_platform
by_series |
| 15 |
ARGONAUTE-small RNA Interactions in Arabidopsis thaliana Identified by High-Throughput Sequencing (GSE12037) |
[HT-Seq] Carrington-Arabidopsis-Illumina-miRNA-AGO-high-throughput sequencing (GPL7029) |
Donald Danforth Plant Science Center |
2008-07-08 |
シロイヌナズナ(Arabidopsis thaliana)
|
2,061,848
(515,462×4)
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4 |
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by_platform
by_series |
| 16 |
Metatranscriptomes of phytoplankton blooms from an ocean acidification mesocosm experiment (GSE10119) |
[HT-Seq] Plymouth Marine Laboratory 454 sequences, 439K (GPL6355) |
Plymouth Marine Laboratory |
2008-01-09 |
marine metagenome
 |
1,755,632
(438,908×4)
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4 |
by_platform
by_series |
| 17 |
Characterization of unique small RNA populations from rice grain (GSE13152) |
[HT-Seq] Monsanto-rice-454-smallRNAs-high throughput sequencing (GPL7470) |
Monsanto |
2008-10-10 |
イネ(Oryza sativa)
|
1,546,432
(386,608×4)
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1 |
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3 |
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by_platform
by_series |
| 18 |
Zebrafish Zili- and Ziwi-interacting small RNAs (GSE12547) |
[HT-Seq] Hubrecht Institute Zebrafish Zili- and Ziwi-interacting small RNAs (454 GS FLX system) (GPL7207) |
Hubrecht Institute |
2008-08-26 |
ゼブラフィッシュ(Danio rerio)
 |
1,497,144
(249,524×6)
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4 |
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2 |
by_platform
by_series |
| 19 |
High-throughput sequencing of small RNAs from Arabidopsis thaliana (GSE5228) |
[HT-Seq] Arabidopsis thaliana high-throughput small RNA sequencing (GPL3968) |
Whitehead Institute for Biomedical Research, MIT Department of Biology |
2006-07-04 |
シロイヌナズナ(Arabidopsis thaliana)
|
1,360,456
(340,114×4)
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1 |
1 |
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1 |
1 |
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by_platform
by_series |
| 20 |
High-throughput pyrosequencing of endogenous small RNAs from Solanum lycopersicum leaf and fruit (GSE12081) |
[HT-Seq] High-throughput pyrosequencing of small RNAs in Tomato fruits and leaves (GPL7043) |
University of East Anglia |
2008-07-11 |
トマト(Solanum lycopersicum)
 |
625,438
(312,719×2)
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|
1 |
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1 |
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by_platform
by_series |