遺伝子発現バンク(GEO)目次バージョン:2014-04-12English page
NCBI Gene Expression Omnibus (GEO) に登録されているデータを、測定技術と材料の属性に基づいて整理しました。

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データ単位 : [ データセット / サンプル / プラットフォーム ] 単位の説明>> <<説明を隠す
データセット  : 研究・目的ごとにまとめられた発現データの集合 (発現データマトリクス)
サンプル  : 測定に附された生体試料
プラットフォーム : 発現定量のための測定プロトコル
各タブ内に表示される数値は、そのタブ分類に属するデータ数です。
  ヒト
(116)
  霊長
(0)
  齧歯
(70)
  哺乳
(0)
  脊椎
(0)
  無脊椎
(3)
  植物
(23)
  バクテリア
(21)
  ウィルス
(0)
  ファージ
(0)
  未分類
(0)
  すべて
(285)
 
  SAGE NlaIII
(0)
  SAGE RsaI
(0)
  SAGE Sau3A
(0)
  MPSS
(0)
  GeneChip
(127)
  タイリングアレイ
(6)
  cDNAアレイ
(18)
  オリゴアレイ
(63)
  ビーズアレイ
(9)
  タンパク質アレイ
(0)
  抗体アレイ
(0)
  RT-PCR
(0)
  HT-Seq
(60)
  その他
(0)
  すべて
(285)
 
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タイトル プラットフォーム 登録機関 登録日 生物種 データサイズ
(プローブ数×サンプル数)
測定サンプル NCBI
FTP
サイト
動物 植物  
結合 生殖 消化 分泌 胎児 地上構造 若い地上構造 成長点 花・生殖 種子・果実 混合 分類不能
1 Copy number variation in the porcine genome (GSE19047) [オリゴアレイ] NimbleGen agrsci porcine 2.1M v1 (GPL9664) Aarhus University, Faculty of Agricultural Sciences 2009-11-16 ブタ、イノシシ(Sus scrofa)
Sus scrofa domestica
102,881,808
(2,143,371×48)
48 by_platform
by_series
2 Investigation of the methylation changes occurring during breast cancer pathology (GSE43095) [オリゴアレイ] NimbleGen Human DNA Methylation 2.1M Deluxe Promoter Array [100205_HG18_Promoter_MeDIP_HX1] (GPL13301) University of Aarhus 2012-12-21 ヒト(Homo sapiens)
Homo sapiens
53,429,775
(2,137,191×25)
25 by_platform
by_series
3 A Snapshot of Copy Number Variation in the pig genome (GSE10753) [オリゴアレイ] Nimblegen 385K pig array CGH (GPL6553) Aarhus University, Faculty of Agricultural Sciences 2008-03-06 ブタ、イノシシ(Sus scrofa)
Sus scrofa domestica
9,426,672
(392,778×24)
24 by_platform
by_series
4 Classifications within Molecular Subtypes Enables Identification of BRCA1/BRCA2 Mutation Carriers by RNA Tumor Profiling (GSE40115) [オリゴアレイ] Agilent-029949 Custom SurePrint G3 Human GE 8x60K Microarray [Probe Name version] (GPL15931) Odense University Hospital 2012-08-14 ヒト(Homo sapiens)
Homo sapiens
7,840,818
(42,846×183)
183 by_platform
by_series
5 Long non-coding RNA HOTAIR is an independent prognostic marker of metastasis in estrogen receptor positive primary breast cancer (GSE48408) [オリゴアレイ] Agilent-029949 Custom SurePrint G3 Human GE 8x60K Microarray [Probe Name version] (GPL15931) Odense University Hospital 2013-06-28 ヒト(Homo sapiens)
Homo sapiens
7,026,744
(42,846×164)
164 by_platform
by_series
6 Transcriptome responses to combined biotic and abiotic stresses in Arabidopsis thaliana (GSE41935) [オリゴアレイ] NimbleGen Arabidopsis thaliana 4x72K Array [080306_AT6_expr] (GPL16226) Technical University of Denmark 2012-10-31 シロイヌナズナ(Arabidopsis thaliana)
Arabidopsis thaliana
6,288,660
(30,380×207)
207 by_platform
by_series
7 Comparative genomic profiling and gene expression of Escherichia coli O103:H25 Oslo 2006 outbreak strain (GSE9418) [オリゴアレイ] Ecoli_pangenome_CBSDTU_v1 (GPL5647) DTU 2007-10-24 大腸菌(Escherichia coli)
Escherichia coli
4,631,748
(385,979×12)
12 by_platform
by_series
8 Analysis of severe feather pecking behavior in a high feather pecking selection line (GSE10380) [オリゴアレイ] ARK-Genomics G. gallus 20K v1.0 (GPL5480) Aarhus University, Faculty of Agricultural Sciences 2008-02-05 ニワトリ(Gallus gallus)
Gallus gallus
3,969,504
(22,176×179)
179 by_platform
by_series
9 Characterization of probiotic Escherichia coli isolates using a novel pangenome microarray (GSE8595) [オリゴアレイ] Ecoli_pangenome_CBSDTU_v1 (GPL5647) DTU 2007-07-26 大腸菌(Escherichia coli)
Escherichia coli
3,859,790
(385,979×10)
10 by_platform
by_series
10 The Transcriptionally Active Regions in the Genome of Bacillus subtilis (GSE16086) [オリゴアレイ] BaSysBio Bacillus subtilis T1 385K array version 1 [070910_basysbio_expr] (GPL8486) Technical University of Denmark 2009-05-13 Bacillus subtilis subsp. subtilis str. 168
Bacillus subtilis subsp. subtilis str. 168
3,831,490
(383,149×10)
10 by_platform
by_series
11 Classifications within Molecular Subtypes Enables Identification of BRCA1/BRCA2 Mutation Carriers by RNA Tumor Profiling (GSE40115) [オリゴアレイ] HMC Human 29k Array (GPL15932) Odense University Hospital 2012-08-14 ヒト(Homo sapiens)
Homo sapiens
2,660,548
(28,919×92)
92 by_platform
by_series
12 Gene expression signatures predict outcome in non-muscle invasive bladder carcinoma - a multi-center validation study (GSE5479) [オリゴアレイ] MDL human 3k oligo array (GPL4060) Aarhus University Hospital, Skejby 2006-08-09 ヒト(Homo sapiens)
Homo sapiens
2,482,176
(3,072×808)
808 by_platform
by_series
13 Mapping of HNF4α binding sites, acetylation of histone H3 and expression in Caco2 cells (GSE7745) [オリゴアレイ] Nimblegen Homo sapiens promoter array hg17 (GPL5139) Univ. of Copenhagen 2007-05-07 ヒト(Homo sapiens)
Homo sapiens
2,155,854
(359,309×6)
6 by_platform
by_series
14 Transcriptomic analysis of porcine skeletal muscles exposed to a single bout of endurance exercise (GSE30659) [オリゴアレイ] DJF Pig oligo 27K1 ver1 (GPL5972) University of Aarhus 2011-07-14 ブタ、イノシシ(Sus scrofa)
Sus scrofa domestica
2,101,248
(27,648×76)
76 by_platform
by_series
15 Prediction of metastasis from low-malignant breast cancer by gene expression profiling (GSE4796) [オリゴアレイ] HMC Human 29k Array (GPL3733) Odense University Hospital 2006-05-09 ヒト(Homo sapiens)
Homo sapiens
1,735,860
(28,931×60)
60 by_platform
by_series
16 Spotting and validation of a Genome wide oligonucleotide chip with duplicate measurement of each gene (GSE3163) [オリゴアレイ] Human 58K oligonucleotide chip (GPL2761) Odense University Hospital 2005-08-18 ヒト(Homo sapiens)
Homo sapiens
1,631,504
(58,268×28)
28 by_platform
by_series
17 Tissue specific expression of non-coding RNAs (GSE41947) [オリゴアレイ] NimbleGen Human custom 135K (GPL16228) Aarhus University 2012-10-31 ヒト(Homo sapiens)
Homo sapiens
1,215,576
(33,766×36)
3 3 6 6 3 3 3 6 3 by_platform
by_series
18 Response of methicillin-resistant Staphylococcus aureus USA300 to a subinhibitory concentration of thioridazine - alone and in combination with dicloxacillin (GSE43759) [オリゴアレイ] NimbleGen S.aureus USA300 FPR3757 12 x 135K array v1.0 [110204_Saureus_FPR3757_JK_exp] (GPL16549) University of Southern Denmark 2013-01-25 Staphylococcus aureus subsp. aureus USA300_FPR3757
Staphylococcus aureus subsp. aureus USA300_FPR3757
1,145,655
(127,295×9)
9 by_platform
by_series
19 Long oligo- and cDNA-based microarray gene expression in nine porcine muscle tissues using a common reference design (GSE10597) [オリゴアレイ] DJF Pig oligo 27K1 ver1 (GPL5972) Aarhus University 2008-02-21 ブタ、イノシシ(Sus scrofa)
Sus scrofa domestica
1,105,920
(27,648×40)
9 31 by_platform
by_series
20 Transcriptomic analysis of porcine muscle Longissimus dorsi (LD) exposed to a single bout of endurance exercise (GSE30014) [オリゴアレイ] DJF Pig oligo 27K1 ver1 (GPL5972) University of Aarhus 2011-06-16 ブタ、イノシシ(Sus scrofa)
Sus scrofa domestica
1,078,272
(27,648×39)
39 by_platform
by_series
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