遺伝子発現バンク(GEO)目次バージョン：2013-04-06English page

NCBI Gene Expression Omnibus (GEO) に登録されているデータを、測定技術と材料の属性に基づいて整理しました。

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SAGE NlaIII (0)   SAGE RsaI (0)   SAGE Sau3A (0)   MPSS (0)   GeneChip (7,355)   タイリングアレイ (676)   cDNAアレイ (10,532)   オリゴアレイ (19,682)   ビーズアレイ (0)   タンパク質アレイ (0)   抗体アレイ (0)   RT-PCR (51)   HT-Seq (729)   その他 (57)   すべて (39,082)     脳 (89)   血 (312)   結合 (123)   生殖 (41)   筋 (90)   消化 (193)   肝 (64)   肺 (199)   腎 (5)   分泌 (69)   胎児 (4)   地上構造 (0)   若い地上構造 (0)   根 (0)   成長点 (0)   花・生殖 (0)   種子・果実 (0)   混合 (59)   分類不能 (18,434)   すべて (19,682)   [1]      «      1   |   2   |   3   |   4   |   5      »      [16] サンプルID タイトル データ数 登録機関 登録日 プラットフォーム サンプルタイプ 生物種 臓器分類 分類の根拠 黒字の強調部分が臓器分類時に用いたキーワードになります。 21 GSM547345 Sample47_Mock_cy3_Treated_cy5_MDS 2,448 The J. Craig Venter Institute 2010-05-26 [オリゴアレイ] JCVI PFGRC Streptococcus mutans 10K v2.1 array designed primarily based on strain UA159 (GPL5911) RNA Streptococcus mutans UA159 末梢血 Aminosilane-coated slides were prehybridized in 5x SSC (1x SSC is 0.15 M NaCl plus 0.015 M sodium citrate) (Invitrogen), 0.1% sodium dodecyl sulfate, and 1% bovine serum albumin at 42°C for 60 min. The slides then were washed at room temperature with distilled water, dipped in isopropanol, and allowed to dry. Equal volumes of the appropriate Cy3- and Cy5-labeled probes were combined, dried and then resuspended in a solution of 40% formamide, 5x SSC, and 0.1% sodium dodecyl sulfate. Resuspended probes were heated to 95ºC prior to hybridization. The probe mixture then was added to the microarray slide and allowed to hybridize overnight at 42°C. Hybridized slides were washed sequentially in solutions of 1x SSC-0.2% SDS, 0.1x SSC-0.2% SDS, and 0.1x SSC at room temperature, then dried in air, and scanned with an Axon GenePix 4000 scanner (http://intranet.jtc.jcvsf.org/sops/M008.pdf). All wash buffers were supplemented with 1-ml of 0.1M DTT per liter of wash buffer. 22 GSM547346 Sample967_Mock_cy3_Treated_cy5_MDS 2,448 The J. Craig Venter Institute 2010-05-26 [オリゴアレイ] JCVI PFGRC Streptococcus mutans 10K v2.1 array designed primarily based on strain UA159 (GPL5911) RNA Streptococcus mutans UA159 末梢血 Aminosilane-coated slides were prehybridized in 5x SSC (1x SSC is 0.15 M NaCl plus 0.015 M sodium citrate) (Invitrogen), 0.1% sodium dodecyl sulfate, and 1% bovine serum albumin at 42°C for 60 min. The slides then were washed at room temperature with distilled water, dipped in isopropanol, and allowed to dry. Equal volumes of the appropriate Cy3- and Cy5-labeled probes were combined, dried and then resuspended in a solution of 40% formamide, 5x SSC, and 0.1% sodium dodecyl sulfate. Resuspended probes were heated to 95ºC prior to hybridization. The probe mixture then was added to the microarray slide and allowed to hybridize overnight at 42°C. Hybridized slides were washed sequentially in solutions of 1x SSC-0.2% SDS, 0.1x SSC-0.2% SDS, and 0.1x SSC at room temperature, then dried in air, and scanned with an Axon GenePix 4000 scanner (http://intranet.jtc.jcvsf.org/sops/M008.pdf). All wash buffers were supplemented with 1-ml of 0.1M DTT per liter of wash buffer. 23 GSM547347 Sample969_Mock_cy3_Treated_cy5_MDS 2,448 The J. Craig Venter Institute 2010-05-26 [オリゴアレイ] JCVI PFGRC Streptococcus mutans 10K v2.1 array designed primarily based on strain UA159 (GPL5911) RNA Streptococcus mutans UA159 末梢血 Aminosilane-coated slides were prehybridized in 5x SSC (1x SSC is 0.15 M NaCl plus 0.015 M sodium citrate) (Invitrogen), 0.1% sodium dodecyl sulfate, and 1% bovine serum albumin at 42°C for 60 min. The slides then were washed at room temperature with distilled water, dipped in isopropanol, and allowed to dry. Equal volumes of the appropriate Cy3- and Cy5-labeled probes were combined, dried and then resuspended in a solution of 40% formamide, 5x SSC, and 0.1% sodium dodecyl sulfate. Resuspended probes were heated to 95ºC prior to hybridization. The probe mixture then was added to the microarray slide and allowed to hybridize overnight at 42°C. Hybridized slides were washed sequentially in solutions of 1x SSC-0.2% SDS, 0.1x SSC-0.2% SDS, and 0.1x SSC at room temperature, then dried in air, and scanned with an Axon GenePix 4000 scanner (http://intranet.jtc.jcvsf.org/sops/M008.pdf). All wash buffers were supplemented with 1-ml of 0.1M DTT per liter of wash buffer. 24 GSM547348 Sample31_Mock_cy5_Treated_cy3_MDS 2,448 The J. Craig Venter Institute 2010-05-26 [オリゴアレイ] JCVI PFGRC Streptococcus mutans 10K v2.1 array designed primarily based on strain UA159 (GPL5911) RNA Streptococcus mutans UA159 末梢血 Aminosilane-coated slides were prehybridized in 5x SSC (1x SSC is 0.15 M NaCl plus 0.015 M sodium citrate) (Invitrogen), 0.1% sodium dodecyl sulfate, and 1% bovine serum albumin at 42°C for 60 min. The slides then were washed at room temperature with distilled water, dipped in isopropanol, and allowed to dry. Equal volumes of the appropriate Cy3- and Cy5-labeled probes were combined, dried and then resuspended in a solution of 40% formamide, 5x SSC, and 0.1% sodium dodecyl sulfate. Resuspended probes were heated to 95ºC prior to hybridization. The probe mixture then was added to the microarray slide and allowed to hybridize overnight at 42°C. Hybridized slides were washed sequentially in solutions of 1x SSC-0.2% SDS, 0.1x SSC-0.2% SDS, and 0.1x SSC at room temperature, then dried in air, and scanned with an Axon GenePix 4000 scanner (http://intranet.jtc.jcvsf.org/sops/M008.pdf). All wash buffers were supplemented with 1-ml of 0.1M DTT per liter of wash buffer. 25 GSM547349 Sample32_Mock_cy5_Treated_cy3_MDS 2,448 The J. Craig Venter Institute 2010-05-26 [オリゴアレイ] JCVI PFGRC Streptococcus mutans 10K v2.1 array designed primarily based on strain UA159 (GPL5911) RNA Streptococcus mutans UA159 末梢血 Aminosilane-coated slides were prehybridized in 5x SSC (1x SSC is 0.15 M NaCl plus 0.015 M sodium citrate) (Invitrogen), 0.1% sodium dodecyl sulfate, and 1% bovine serum albumin at 42°C for 60 min. The slides then were washed at room temperature with distilled water, dipped in isopropanol, and allowed to dry. Equal volumes of the appropriate Cy3- and Cy5-labeled probes were combined, dried and then resuspended in a solution of 40% formamide, 5x SSC, and 0.1% sodium dodecyl sulfate. Resuspended probes were heated to 95ºC prior to hybridization. The probe mixture then was added to the microarray slide and allowed to hybridize overnight at 42°C. Hybridized slides were washed sequentially in solutions of 1x SSC-0.2% SDS, 0.1x SSC-0.2% SDS, and 0.1x SSC at room temperature, then dried in air, and scanned with an Axon GenePix 4000 scanner (http://intranet.jtc.jcvsf.org/sops/M008.pdf). All wash buffers were supplemented with 1-ml of 0.1M DTT per liter of wash buffer. 26 GSM547553 Sample48_Mock_cy5_Treated_cy3_MDS 2,448 The J. Craig Venter Institute 2010-05-26 [オリゴアレイ] JCVI PFGRC Streptococcus mutans 10K v2.1 array designed primarily based on strain UA159 (GPL5911) RNA Streptococcus mutans UA159 末梢血 Aminosilane-coated slides were prehybridized in 5x SSC (1x SSC is 0.15 M NaCl plus 0.015 M sodium citrate) (Invitrogen), 0.1% sodium dodecyl sulfate, and 1% bovine serum albumin at 42°C for 60 min. The slides then were washed at room temperature with distilled water, dipped in isopropanol, and allowed to dry. Equal volumes of the appropriate Cy3- and Cy5-labeled probes were combined, dried and then resuspended in a solution of 40% formamide, 5x SSC, and 0.1% sodium dodecyl sulfate. Resuspended probes were heated to 95ºC prior to hybridization. The probe mixture then was added to the microarray slide and allowed to hybridize overnight at 42°C. Hybridized slides were washed sequentially in solutions of 1x SSC-0.2% SDS, 0.1x SSC-0.2% SDS, and 0.1x SSC at room temperature, then dried in air, and scanned with an Axon GenePix 4000 scanner (http://intranet.jtc.jcvsf.org/sops/M008.pdf). All wash buffers were supplemented with 1-ml of 0.1M DTT per liter of wash buffer. 27 GSM252718 14028_Promoterlibmix_stable+unstable_sort2_mouseSpleen(+)_115218_1 386,350 Vaccine Research Institute of San Diego 2007-12-20 [オリゴアレイ] NIMBLE_MMCCSAL01_380k (GPL5728) other Salmonella enterica subsp. enterica serovar Typhimurium 脾臓 14028s Promoterlibmix_stable+unstable, sort2, GFP(+) in spleens of nude mouse 14028s Promoterlibmix_stable+unstable 28 GSM575620 mt-2 vs IHF-, rep1 11,520 CNB-CSIC 2010-08-06 [オリゴアレイ] Progenika Biopharma Pseudomonas putida MPA-02-0001 (GPL10767) RNA 有機溶媒耐性細菌(Pseudomonas putida) リンパ節 Pseudomonas putida mt-2 Pseudomonas putida mutant IHF- 29 GSM575621 mt-2 vs IHF-, rep2 11,520 CNB-CSIC 2010-08-06 [オリゴアレイ] Progenika Biopharma Pseudomonas putida MPA-02-0001 (GPL10767) RNA 有機溶媒耐性細菌(Pseudomonas putida) リンパ節 Pseudomonas putida mt-2 Pseudomonas putida mutant IHF- 30 GSM575622 mt-2 vs IHF-, rep3 11,520 CNB-CSIC 2010-08-06 [オリゴアレイ] Progenika Biopharma Pseudomonas putida MPA-02-0001 (GPL10767) RNA 有機溶媒耐性細菌(Pseudomonas putida) リンパ節 Pseudomonas putida mt-2 Pseudomonas putida mutant IHF- 31 GSM822852 WT ANAEROBIC Cy3 PA3880 DEL ANAEROBIC Cy5 14228556 6,052 J Craig Venter Institute 2011-10-26 [オリゴアレイ] JCVI PFGRC Pseudomonas aeruginosa 13K v3 array designed primarily based on strain PAO1 (GPL10633) RNA 緑膿菌(Pseudomonas aeruginosa) 末梢血 WT ANAEROBIC Cy3 PA3880 DEL ANAEROBIC Cy5 14228556 32 GSM822884 WT ANAEROBIC Cy5 PA3880.DEL ANAEROBIC Cy3 14228555 6,052 J Craig Venter Institute 2011-10-26 [オリゴアレイ] JCVI PFGRC Pseudomonas aeruginosa 13K v3 array designed primarily based on strain PAO1 (GPL10633) RNA 緑膿菌(Pseudomonas aeruginosa) 末梢血 WT ANAEROBIC Cy5 PA3880.DEL ANAEROBIC Cy3 14228555 33 GSM822885 WT STATIONARY Cy3 PA3880 DEL STATIONARY Cy5 14228557 6,052 J Craig Venter Institute 2011-10-26 [オリゴアレイ] JCVI PFGRC Pseudomonas aeruginosa 13K v3 array designed primarily based on strain PAO1 (GPL10633) RNA 緑膿菌(Pseudomonas aeruginosa) 末梢血 WT STATIONARY Cy3 PA3880 DEL STATIONARY Cy5 14228557 34 GSM822930 WT STATIONARY Cy5 PA3880 DEL STATIONARY Cy3 14228561 6,052 J Craig Venter Institute 2011-10-26 [オリゴアレイ] JCVI PFGRC Pseudomonas aeruginosa 13K v3 array designed primarily based on strain PAO1 (GPL10633) RNA 緑膿菌(Pseudomonas aeruginosa) 末梢血 WT STATIONARY Cy5 PA3880 DEL STATIONARY Cy3 14228561 35 GSM933016 Strain_MC58_blood replicate1 15,360 University of Wuerzburg 2012-05-18 [オリゴアレイ] Wuerzburg Neisseria meningitidis 15.4K (GPL8787) RNA 髄膜炎菌(Neisseria meningitidis) 末梢血 RNA from strain MC58 grown in PPM+ and exposed to human whole blood Common Reference 36 GSM933017 Strain_MC58_blood replicate2 15,360 University of Wuerzburg 2012-05-18 [オリゴアレイ] Wuerzburg Neisseria meningitidis 15.4K (GPL8787) RNA 髄膜炎菌(Neisseria meningitidis) 末梢血 RNA from strain MC58 grown in PPM+ and exposed to human whole blood Common Reference 37 GSM933018 Strain_MC58_blood replicate3 15,360 University of Wuerzburg 2012-05-18 [オリゴアレイ] Wuerzburg Neisseria meningitidis 15.4K (GPL8787) RNA 髄膜炎菌(Neisseria meningitidis) 末梢血 RNA from strain MC58 grown in PPM+ and exposed to human whole blood Common Reference 38 GSM933019 Strain_MC58_CSF replicate1 15,360 University of Wuerzburg 2012-05-18 [オリゴアレイ] Wuerzburg Neisseria meningitidis 15.4K (GPL8787) RNA 髄膜炎菌(Neisseria meningitidis) 末梢血 RNA from strain MC58 grown in PPM+ and exposed to human csf Common Reference 39 GSM933020 Strain_MC58_CSF replicate2 15,360 University of Wuerzburg 2012-05-18 [オリゴアレイ] Wuerzburg Neisseria meningitidis 15.4K (GPL8787) RNA 髄膜炎菌(Neisseria meningitidis) 末梢血 RNA from strain MC58 grown in PPM+ and exposed to human csf Common Reference 40 GSM933021 Strain_MC58_CSF replicate3 15,360 University of Wuerzburg 2012-05-18 [オリゴアレイ] Wuerzburg Neisseria meningitidis 15.4K (GPL8787) RNA 髄膜炎菌(Neisseria meningitidis) 末梢血 RNA from strain MC58 grown in PPM+ and exposed to human csf Common Reference [1]      «      1   |   2   |   3   |   4   |   5      »      [16]