遺伝子発現バンク(GEO)目次バージョン：2013-04-06English page

NCBI Gene Expression Omnibus (GEO) に登録されているデータを、測定技術と材料の属性に基づいて整理しました。

ヒト (3,705)   霊長 (37)   齧歯 (1,748)   哺乳 (295)   脊椎 (402)   無脊椎 (1,004)   植物 (2,170)   バクテリア (1,636)   ウィルス (78)   ファージ (8)   未分類 (399)   すべて (11,528)

SAGE NlaIII (37)   SAGE RsaI (0)   SAGE Sau3A (1)   MPSS (9)   GeneChip (78)   タイリングアレイ (226)   cDNAアレイ (558)   オリゴアレイ (799)   ビーズアレイ (0)   タンパク質アレイ (0)   抗体アレイ (0)   RT-PCR (0)   HT-Seq (432)   その他 (26)   すべて (2,170)   [1]      «      1   |   2   |   3   |   4   |   5      »      [12] プラットフォームID タイトル プローブ数 登録機関 登録日 製作元 生物種 測定技術分類 分類の根拠 黒字の強調部分が測定技術分類時に用いたキーワードになります。 21 GPL10187 Affymetrix S. pombe Tiling 1.0FR Array [custom CDF: Sp20b_M_v04] 5,483 Friedrich Miescher Institute for Biomedical Research 2010-03-16 Affymetrix 分裂酵母(Schizosaccharomyces pombe) タイリングアレイ in situ oligonucleotide, Affymetrix S. pombe Tiling 1.0FR Array [custom CDF: Sp20b_M_v04], 22 GPL9672 Affymetrix S. pombe Tiling 1.0FR Array [custom CDF: Sp-TMA.cdf] 4,856 Instituto de Biología Funcional y Genómica (IBFG) 2009-11-13 Affymetrix 分裂酵母(Schizosaccharomyces pombe) タイリングアレイ in situ oligonucleotide, Affymetrix S. pombe Tiling 1.0FR Array [custom CDF: Sp-TMA.cdf], Affymetrix S. pombe Tiling 1.0FR(GPL7715) Array based on a custom CDF (Sp-TMA.cdf) for Schizosaccharomyces pombe. Identical to GPL7715 but a custom cdf environment was used to extract data. To obtain the custom CDF we filter probes present in Affymetrix S. pombe Tiling 1.0FR Array mapping against the Sanger Centre Schizosaccharomyces pombe genome annotation release of July 17, 2009. 23 GPL7715 [Sp20b_M] Affymetrix S. pombe Tiling 1.0FR Array 0 Affymetrix, Inc. 2008-12-01 Affymetrix 分裂酵母(Schizosaccharomyces pombe) タイリングアレイ in situ oligonucleotide, [Sp20b_M] Affymetrix S. pombe Tiling 1.0FR Array, Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® S. pombe Tiling 1.0FR Array is designed for identifying novel transcripts, mapping sites of protein/DNA interaction in chromatin immunoprecipitation (ChIP) experiments, and other whole-genome experiments. The S. pombe 1.0FR Array is a single array comprised of over 1.2 million perfect match/mismatch probe pairs tiled through the complete Schizosaccharomyces pombe genome. Sequence information for chromosomes 1 to 3 and telomere clones was drawn from the Wellcome Trust Sanger Institute (September 2004). Probes are tiled for both strands of the genome at an average of 20 base pair resolution, as measured from the central position of adjacent 25-mer oligos, creating an overlap of approximately 5 base pairs on adjacent probes. BPMAP and other files can be downloaded from the Affymetrix Web site below. 24 GPL4034 Snyder - Nimblegen S.mikatae WGT 50-60; 50-60 380,448 The Australian Wine Research Institute 2006-07-26 Nimblegen Saccharomyces mikatae タイリングアレイ in situ oligonucleotide, Snyder - Nimblegen S.mikatae WGT 50-60; 50-60, Whole genome tiling array designed for S. mikatae. 50mer oligos tiled every 60 bp on the Watson Strand, 50mer oligos tiled every 60bp on the Crick strand with a 30bp offset. 25 GPL13972 Agilent-031697 Yeast 8x60k Tiling Array 62,976 Stowers Institute 2011-07-26 Agilent Saccharomyces cerevisiae S288c タイリングアレイ in situ oligonucleotide, Agilent-031697 Yeast 8x60k Tiling Array, 26 GPL9286 Yeast 2.7M whole genome tiling array (Sc03b_MR_V04) 2,697,594 UCLA 2009-09-24 Affymetrix 出芽酵母(Saccharomyces cerevisiae) タイリングアレイ in situ oligonucleotide, Yeast 2.7M whole genome tiling array (Sc03b_MR_V04), 27 GPL4065 Affymetrix S. cerevisiae tiling 1.0R (Sc03b_MR_v03.bpmap) 2,660,310 University of Washington 2006-08-07 Affymetrix 出芽酵母(Saccharomyces cerevisiae) タイリングアレイ in situ oligonucleotide, Affymetrix S. cerevisiae tiling 1.0R (Sc03b_MR_v03.bpmap), Strain S288C Design based on October 2003 cerevisiae genome 28 GPL6476 Affymetrix GeneChip S. cerevisiae Tiling 1.0R Array (Sc03b_MR_v04) 2,635,714 FHCRC 2008-02-08 Affymetrix 出芽酵母(Saccharomyces cerevisiae) タイリングアレイ in situ oligonucleotide, Affymetrix GeneChip S. cerevisiae Tiling 1.0R Array (Sc03b_MR_v04), 29 GPL15833 NimbleGen Saccharomyces cerevisiae 730K 090319_Scer_KH_CGH 702,980 Fred Hutchinson Cancer Research Center 2012-07-20 NimbleGen 出芽酵母(Saccharomyces cerevisiae) タイリングアレイ in situ oligonucleotide, NimbleGen Saccharomyces cerevisiae 730K 090319_Scer_KH_CGH, NimbleGen HX3 custom array containing ~700000 experimental probes tiling both the Watson and Crick strands of the S. cerevisiae genome. Forward and Reverse probes for each location are complements of eachother 30 GPL3471 NASA Ames Research Center yeast 360K whole genome tiling 390,643 NASA Ames Research Center 2006-02-20 Genome Research Facility, NASA Ames Research Center 出芽酵母(Saccharomyces cerevisiae) タイリングアレイ in situ oligonucleotide, NASA Ames Research Center yeast 360K whole genome tiling, GenBank accession numbers: NC_001133-NC_001148, NC_001224 31 GPL7511 NimbleGen Saccharomyces cerevisiae Whole Genome Tiling Array (385K) 386,527 NimbleGen Systems, Inc. 2008-10-22 Nimblegen 出芽酵母(Saccharomyces cerevisiae) タイリングアレイ in situ oligonucleotide, NimbleGen Saccharomyces cerevisiae Whole Genome Tiling Array (385K), Chromosome mappings based on Oct 2003 UCSC genome release. 32 GPL4613 NimbleGen Saccharomyces cerevisiae_ChIP whole-genome tiling array 386,231 Brandeis University 2006-11-30 NimbleGen Systems Inc. 出芽酵母(Saccharomyces cerevisiae) タイリングアレイ in situ oligonucleotide, NimbleGen Saccharomyces cerevisiae_ChIP whole-genome tiling array, NimbleGen catalog #C4214-00-01; whole genome 50mer tiling at 32 bp spacing. 33 GPL9529 UW-Madison Saccharomyces cerevisiae 380K tiling array 51mer oligos 2006-10-12 379,876 University of Wisconsin - Madison 2009-11-04 NimbleGen 出芽酵母(Saccharomyces cerevisiae) タイリングアレイ in situ oligonucleotide, UW-Madison Saccharomyces cerevisiae 380K tiling array 51mer oligos 2006-10-12, 34 GPL5683 NimbleGen_S.cerevisiae_tiling_array 379,216 Antonis Kirmizis 2007-07-30 NimbleGen Systems Inc. 出芽酵母(Saccharomyces cerevisiae) タイリングアレイ in situ oligonucleotide, NimbleGen_S.cerevisiae_tiling_array, 379K element tiling array based on sacCer1 build of the yeast genome. The array contains 50-mer oligonucleotides, positioned at every 64 basepairs (bp) throughout the yeast genome representing both DNA strands. 35 GPL15469 NimbleGen S. cerevisiae ChIP-chip 385K Whole-Genome Tiling Array [2006-07-18_Scerevisiae_ChIP] 378,684 NimbleGen Systems, Inc. 2012-04-19 Roche NimbleGen 出芽酵母(Saccharomyces cerevisiae) タイリングアレイ in situ oligonucleotide, NimbleGen S. cerevisiae ChIP-chip 385K Whole-Genome Tiling Array [2006-07-18_Scerevisiae_ChIP], Design name 2006-07-18_Scerevisiae_ChIP Format: 385K Source: RefSeq Build: sacCer1 Probe Length: 50mer Median Probe Spacing: 32bp http://www.nimblegen.com/products/chip/wgt/scerevisiae/385k/index.html 36 GPL16747 2006-07-18 Scerevisiae ChIP Stefan Jentsch MPI Biochemistry S.cerevisiae 385K Tiling Array Version 1 378,684 Max Planck Institute of Biochemistry 2013-03-04 NimbleGen 出芽酵母(Saccharomyces cerevisiae) タイリングアレイ in situ oligonucleotide, 2006-07-18 Scerevisiae ChIP Stefan Jentsch MPI Biochemistry S.cerevisiae 385K Tiling Array Version 1, S.cerevisiae S288C (see e.g. SGD (http://www.yeastgenome.org/)) 2006-07-18_Scerevisiae_ChIP_Stefan Jentsch MPI Biochemistry S.cerevisiae 385K Tiling Array 2006-07-18_Scerevisiae_ChIP_Stefan Jentsch MPI Biochemistry S.cerevisiae 385K Tiling Array Version 1.ndf 2006-07-18_Scerevisiae_ChIP_Stefan Jentsch MPI Biochemistry S.cerevisiae 385K Tiling Array Version 1.pos 37 GPL7699 NimbleGen 385k S. cerevisiae 32bp tiling array 378,684 UNC-Chapel Hill 2008-11-25 Roche NimbleGen 出芽酵母(Saccharomyces cerevisiae) タイリングアレイ in situ oligonucleotide, NimbleGen 385k S. cerevisiae 32bp tiling array, S. cerevisiae whole-genome tiling arrays covering entire genome at 32bp resolution with 50bp probes. 385,000 probes total. 38 GPL3541 Snyder - Nimblegen S.cerevisiae WGT 50-60; 50-120 303,921 The Australian Wine Research Institute 2006-03-10 Nimblegen 出芽酵母(Saccharomyces cerevisiae) タイリングアレイ in situ oligonucleotide, Snyder - Nimblegen S.cerevisiae WGT 50-60; 50-120, Whole genome tiling array designed for S. cerevisiae. 50mer oligos tiled every 60 bp on the Watson Strand, 50mer oligos tiled every 120bp on the Crick strand with a 30bp offset. 39 GPL4563 UW-Madison Saccharomyces cerevisiae tiling array_24mer oligos 190,062 University of Wisconsin - Madison 2006-11-15 Nimblegen Systems, Inc. 出芽酵母(Saccharomyces cerevisiae) タイリングアレイ in situ oligonucleotide, UW-Madison Saccharomyces cerevisiae tiling array_24mer oligos, ChIP-chip whole-genome tiling design. 24mer oligonucleotides. 40 GPL16746 100304 Scer2 MS Chip Stefan Jentsch MPI Biochemistry S.cerevisiae 135K Tiling Array Version 2 135,427 Max Planck Institute of Biochemistry 2013-03-04 NimbleGen 出芽酵母(Saccharomyces cerevisiae) タイリングアレイ in situ oligonucleotide, 100304 Scer2 MS Chip Stefan Jentsch MPI Biochemistry S.cerevisiae 135K Tiling Array Version 2, S.cerevisiae S288C (see e.g. SGD (http://www.yeastgenome.org/)) 100304_Scer2_MS_Chip_Stefan Jentsch MPI Biochemistry S.cerevisiae 135K Tiling Array Version 2.ndf 100304_Scer2_MS_Chip_Stefan Jentsch MPI Biochemistry S.cerevisiae 135K Tiling Array Version 2.pos [1]      «      1   |   2   |   3   |   4   |   5      »      [12]